RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 PRR12Q9ULL5 1215 aa23.79■■□□□ 1.4
FAM3A-202ENST00000359889 BIN1O00499 593 aa23.78■■□□□ 1.4
FAM3A-202ENST00000359889 PLA2G6O60733 806 aa23.78■■□□□ 1.4
FAM3A-202ENST00000359889 CLK2P49760 499 aaKnown RBP23.78■■□□□ 1.4
FAM3A-202ENST00000359889 FAM83BQ5T0W9 1011 aa23.78■■□□□ 1.4
FAM3A-202ENST00000359889 SMARCE1Q969G3 411 aa23.78■■□□□ 1.4
FAM3A-202ENST00000359889 TPM4P67936 248 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 MDM2Q00987 491 aaPredicted RBP23.77■■□□□ 1.4
FAM3A-202ENST00000359889 IL17AQ16552 155 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 UBE2SQ16763 222 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 HS1BP3Q53T59 392 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 ZNF341Q9BYN7 854 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 TMEM60Q9H2L4 133 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 FEM1BQ9UK73 627 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 PPP2R3BQ9Y5P8 575 aa23.77■■□□□ 1.4
FAM3A-202ENST00000359889 GCFC2P16383 781 aaKnown RBP23.76■■□□□ 1.39
FAM3A-202ENST00000359889 UBA7P41226 1012 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 AP3B2Q13367 1082 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 IQCB1Q15051 598 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 ANGEL2Q5VTE6 544 aaKnown RBP23.76■■□□□ 1.39
FAM3A-202ENST00000359889 RASSF8Q8NHQ8 419 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 CCDC39Q9UFE4 941 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 SCAF8Q9UPN6 1271 aaKnown RBP23.76■■□□□ 1.39
FAM3A-202ENST00000359889 PCDHA5Q9Y5H7 936 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 SMTNL1A8MU46 457 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 DPCR1Q3MIW9 517 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 TRIML1Q8N9V2 468 aa23.76■■□□□ 1.39
FAM3A-202ENST00000359889 ASTN2O75129 1339 aaPredicted RBP23.76■■□□□ 1.39
FAM3A-202ENST00000359889 PTMAP06454 111 aaKnown RBP23.75■■□□□ 1.39
FAM3A-202ENST00000359889 LMOD1P29536 600 aaPredicted RBP23.75■■□□□ 1.39
FAM3A-202ENST00000359889 ZYXQ15942 572 aaKnown RBP23.75■■□□□ 1.39
FAM3A-202ENST00000359889 CALCRLQ16602 461 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 TMEM266Q2M3C6 531 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 PPP4R3AQ6IN85 833 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 LPAR1Q92633 364 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 RAB34Q9BZG1 259 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 DACH1Q9UI36 760 aa23.75■■□□□ 1.39
FAM3A-202ENST00000359889 FOSP01100 380 aaPredicted RBP23.74■■□□□ 1.39
FAM3A-202ENST00000359889 SYT17Q9BSW7 474 aa23.74■■□□□ 1.39
FAM3A-202ENST00000359889 USH1GQ495M9 461 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 NBPF12Q5TAG4 269 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-202ENST00000359889 NT5DC1Q5TFE4 455 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 TRPM4Q8TD43 1214 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 KIFC2Q96AC6 838 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 CCSER1Q9C0I3 900 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 A0A087X0B3 334 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 STAT6P42226 847 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 SNAP25P60880 206 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 KIAA1755Q5JYT7 1200 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 PAGE5Q96GU1 130 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 KIAA1683Q9H0B3 1180 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
FAM3A-202ENST00000359889 A0A087WWV3 80 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 SPDYE3A6NKU9 549 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 MARCH6O60337 910 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 USP11P51784 963 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 RRAGBQ5VZM2 374 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 SH3RF1Q7Z6J0 888 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 AOPEPQ8N6M6 819 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 AS3MTQ9HBK9 375 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 PICK1Q9NRD5 415 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 GGA3Q9NZ52 723 aa23.72■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L15C9J2P7 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L13C9JLJ4 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L11C9JVI0 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L18D6R9N7 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L22D6RA61 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L17D6RBQ6 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L19D6RCP7 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L20D6RJB6 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 WDR46O15213 610 aaKnown RBP23.71■■□□□ 1.39
FAM3A-202ENST00000359889 FOXN1O15353 648 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 AFMP43652 599 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP14P54578 494 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L24Q0WX57 530 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 SUPT20HL1Q3ZLR7 823 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 USP17L6PQ6QN14 398 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 POTEDQ86YR6 584 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 DHX40Q8IX18 779 aaKnown RBP23.71■■□□□ 1.39
FAM3A-202ENST00000359889 MLKLQ8NB16 471 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 ANO3Q9BYT9 981 aa23.71■■□□□ 1.39
FAM3A-202ENST00000359889 RANBP17Q9H2T7 1088 aaKnown RBP23.71■■□□□ 1.39
FAM3A-202ENST00000359889 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.71■■□□□ 1.39
FAM3A-202ENST00000359889 DDX25Q9UHL0 483 aaKnown RBP23.71■■□□□ 1.39
FAM3A-202ENST00000359889 EPS15P42566 896 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 SARSP49591 514 aaKnown RBP23.7■■□□□ 1.39
FAM3A-202ENST00000359889 E2F4Q16254 413 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 ISM2Q6H9L7 571 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 TRIM5Q9C035 493 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 CUEDC2Q9H467 287 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 DISC1Q9NRI5 854 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 MAN1B1Q9UKM7 699 aa23.7■■□□□ 1.39
FAM3A-202ENST00000359889 TDP2O95551 362 aa23.7■■□□□ 1.38
FAM3A-202ENST00000359889 SCYL3Q8IZE3 742 aa23.7■■□□□ 1.38
FAM3A-202ENST00000359889 GSDMAQ96QA5 445 aa23.7■■□□□ 1.38
FAM3A-202ENST00000359889 MTMR9Q96QG7 549 aa23.7■■□□□ 1.38
FAM3A-202ENST00000359889 GLIS2Q9BZE0 524 aaPredicted RBP23.7■■□□□ 1.38
FAM3A-202ENST00000359889 ZNF112Q9UJU3 913 aa23.7■■□□□ 1.38
FAM3A-202ENST00000359889 MRPL11Q9Y3B7 192 aaKnown RBP23.7■■□□□ 1.38
FAM3A-202ENST00000359889 GOLGA6L6A8MZA4 724 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms