RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 PCDHB6Q9Y5E3 794 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 SRPRBQ9Y5M8 271 aaKnown RBP15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 FRMPD2Q68DX3 1309 aaPredicted RBP15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 A0A087WWV3 80 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 TRAPPC10P48553 1259 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 DGKZQ13574 1117 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 CLMNQ96JQ2 1002 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 PDHBP11177 359 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 GALNT17Q6IS24 598 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 PTPRAP18433 802 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 MKL1Q969V6 931 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 CLIC6Q96NY7 704 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 ARHGEF10LQ9HCE6 1279 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 PAPPA2Q9BXP8 1791 aa15.75■□□□□ 0.11
CSNK1E-201ENST00000359867 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 FEZ1Q99689 392 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 NAT10Q9H0A0 1025 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 SNCAIPQ9Y6H5 919 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 F5H6K3 240 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 TPM3P06753 285 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 PARP1P09874 1014 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 IREB2P48200 963 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 KLRC3Q07444 240 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 CCDC148Q8NFR7 591 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 KCNH3Q9ULD8 1083 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 ZHX2Q9Y6X8 837 aa15.74■□□□□ 0.11
CSNK1E-201ENST00000359867 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 KIF3CO14782 793 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 NDUFB10O96000 172 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 ZNF75DP51815 510 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 IQCB1Q15051 598 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 ZRSR1Q15695 479 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 CCDC96Q2M329 555 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 SLFN13Q68D06 897 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 ZNF771Q7L3S4 317 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 GPCPD1Q9NPB8 672 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 TMX2Q9Y320 296 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 CELF2O95319 508 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 ITGBL1O95965 494 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 SPP2Q13103 211 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 EARS2Q5JPH6 523 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 CEP57L1Q8IYX8 460 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 BLIDQ8IZY5 108 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 DAGLBQ8NCG7 672 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 PCDHA4Q9UN74 947 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 CSADQ9Y600 493 aa15.73■□□□□ 0.11
CSNK1E-201ENST00000359867 CYTH3O43739 400 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 MTMR2Q13614 643 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 NAA30Q147X3 362 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 SLC35G1Q2M3R5 365 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 CCDC144BQ3MJ40 725 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 TEX2Q8IWB9 1127 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 SLC1A4P43007 532 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 TTC38Q5R3I4 469 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 NOL9Q5SY16 702 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 TTBK2Q6IQ55 1244 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 KRBA2Q6ZNG9 492 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 C11orf57Q6ZUT1 292 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 BPIFA3Q9BQP9 254 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 BARHL2Q9NY43 387 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 HOOK1Q9UJC3 728 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 TUBE1Q9UJT0 475 aa15.72■□□□□ 0.11
CSNK1E-201ENST00000359867 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 GOLGA6L19H0YKK7 550 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 NLRP12P59046 1061 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 ARID5BQ14865 1188 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 ARMC9Q7Z3E5 817 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 ANKRD13AQ8IZ07 590 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 SLC16A2P36021 539 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 GMCL1P1Q8NEA9 526 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 CCDC12Q8WUD4 166 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 VCPKMTQ9H867 229 aa15.71■□□□□ 0.11
CSNK1E-201ENST00000359867 CHRM1P11229 460 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 ASPRV1Q53RT3 343 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 CST9Q5W186 159 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 PLA2G4DQ86XP0 818 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 ZNF280CQ8ND82 737 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 ERCC4Q92889 916 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 OTUD5Q96G74 571 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms