RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CKAP2LQ8IYA6 745 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CCDC26Q8TAB7 109 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SCFD2Q8WU76 684 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ATP6V1G3Q96LB4 118 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 INPP4AQ96PE3 977 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SLF1Q9BQI6 1058 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FAM192AQ9GZU8 254 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ISCUQ9H1K1 167 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 BICC1Q9H694 974 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 VEZTQ9HBM0 779 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 RMND1Q9NWS8 449 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 DBNLQ9UJU6 430 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 NCANO14594 1321 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 JAK2O60674 1132 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 RHOBTB3O94955 611 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 NDUFA10O95299 355 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 HSPD1P10809 573 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ACADSP16219 412 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 INPP5BP32019 993 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 LSP1P33241 339 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SYKP43405 635 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 MKRN3Q13064 507 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 MTMR3Q13615 1198 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 NAA25Q14CX7 972 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 LONRF3Q496Y0 759 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ZNF658Q5TYW1 1059 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 MIS18BP1Q6P0N0 1132 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FOXR1Q6PIV2 292 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CCDC13Q8IYE1 715 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 OTUD6BQ8N6M0 293 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 VGLL2Q8N8G2 317 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 IGDCC4Q8TDY8 1250 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ZNF473Q8WTR7 871 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FAM227BQ96M60 508 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 RNF26Q9BY78 433 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SSU72Q9NP77 194 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 TRPV5Q9NQA5 729 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ARHGEF3Q9NR81 526 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FETUBQ9UGM5 382 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 PLAGL2Q9UPG8 496 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 STXBP5LQ9Y2K9 1186 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CLIC4Q9Y696 253 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SPATA31A5Q5VU36 1347 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SPATA31A6Q5VVP1 1343 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SPATA31A3Q5VYP0 1347 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SPATA31A7Q8IWB4 1347 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SYNRGQ9UMZ2 1314 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 SHTN1A0MZ66 631 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FAM177BA6PVY3 158 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CSF1RP07333 972 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ALAS1P13196 640 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 CDC27P30260 824 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 TDO2P48775 406 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FMR1Q06787 632 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 GCKRQ14397 625 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 NPY5RQ15761 445 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ERMARDQ5T6L9 678 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 OLFM4Q6UX06 510 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 PARP9Q8IXQ6 854 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 C4orf32Q8N8J7 132 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 FAM136AQ96C01 138 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 DHTKD1Q96HY7 919 aaPredicted RBP5.04□□□□□ -1.6
PTPN22-201ENST00000359785 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
PTPN22-201ENST00000359785 BAZ2AQ9UIF9 1905 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 LOC102724159A0A0B4J2E5 919 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 SIGLEC16A6NMB1 481 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 VGLL3A8MV65 326 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 RNF113AO15541 343 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 SART1O43290 800 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 GTPBP6O43824 516 aaPredicted RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 FERP16591 822 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 MMP13P45452 471 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 LMAN1P49257 510 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 ZBED6P86452 979 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 PWP2Q15269 919 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 GALNT17Q6IS24 598 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 IRF2BP1Q8IU81 584 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 C10orf67Q8IYJ2 551 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 GALNT15Q8N3T1 639 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 OLIG1Q8TAK6 271 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 HAPLN3Q96S86 360 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 CCSER1Q9C0I3 900 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 MKNK2Q9HBH9 465 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 HAUS2Q9NVX0 235 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 STIM2Q9P246 746 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 DDX20Q9UHI6 824 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 DDX25Q9UHL0 483 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 C15orf41Q9Y2V0 281 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 SAR1BQ9Y6B6 198 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 A0A0G2JS52 829 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 RNMTO43148 476 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 EIF2S2P20042 333 aaKnown RBP5.03□□□□□ -1.6
PTPN22-201ENST00000359785 DRD4P21917 467 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 CCND1P24385 295 aa5.03□□□□□ -1.6
PTPN22-201ENST00000359785 SNCBQ16143 134 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms