RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CDC37Q16543 378 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 CCDC84Q86UT8 332 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 RASAL3Q86YV0 1011 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 LINC00301Q8NCQ3 95 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 BICD2Q8TD16 824 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 CHURC1Q8WUH1 139 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 WDR18Q9BV38 432 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 KIAA1683Q9H0B3 1180 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 FZD1Q9UP38 647 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 CLIC4Q9Y696 253 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 SMCO2A6NFE2 343 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 WDR46O15213 610 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 SPTLC2O15270 562 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 PLA2G6O60733 806 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 VGLL4Q14135 290 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 QRICH1Q2TAL8 776 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 FEM1BQ9UK73 627 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 CEP131Q9UPN4 1083 aa15.84■□□□□ 0.13
PDLIM5-203ENST00000359265 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.13
PDLIM5-203ENST00000359265 LOC285556D6RIA3 1793 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 CCDC194A0A1B0GVG4 234 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 BMP15O95972 392 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 ME1P48163 572 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 TRAPPC10P48553 1259 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 ADCY7P51828 1080 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 TRAF1Q13077 416 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 SLC39A14Q15043 492 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 KIAA1755Q5JYT7 1200 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 KRT25Q7Z3Z0 450 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 COA7Q96BR5 231 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 PRR12Q9ULL5 1215 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 SNCAIPQ9Y6H5 919 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 ZHX2Q9Y6X8 837 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 MYH7BA7E2Y1 1941 aa15.83■□□□□ 0.12
PDLIM5-203ENST00000359265 COL11A1P12107 1806 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 HTTP42858 3142 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 TRIM75PA6NK02 468 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 C19orf81C9J6K1 198 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 M0R2N6 131 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PPP6R2O75170 966 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 TOB1P50616 345 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 BACE1P56817 501 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PTPAQ15257 358 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 TTC38Q5R3I4 469 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PIK3AP1Q6ZUJ8 805 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 ERO1BQ86YB8 467 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 REXO1Q8N1G1 1221 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PGBD1Q96JS3 809 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 AMNQ9BXJ7 453 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 GLT8D2Q9H1C3 349 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PCDHA6Q9UN73 950 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 PCDHA8Q9Y5H6 950 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
PDLIM5-203ENST00000359265 CENPFP49454 3210 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 BRCA2P51587 3418 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 ABCB7O75027 752 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 PPATQ06203 517 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 SPP2Q13103 211 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 MTMR2Q13614 643 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 FBXO11Q86XK2 927 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 REM2Q8IYK8 340 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 CUL5Q93034 780 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 GZF1Q9H116 711 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 RIC8AQ9NPQ8 531 aa15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 MORC2Q9Y6X9 1032 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-203ENST00000359265 SMCHD1A6NHR9 2005 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 RLFQ13129 1914 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 A0A1W2PQ27 194 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 A0A1W2PQ64 194 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 A0A1W2PQD8 194 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 SPDYE5A6NIY4 337 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 H0YGN5 161 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 ATP2B1P20020 1258 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 MRPL12P52815 198 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 EARS2Q5JPH6 523 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 LDLRAD1Q5T700 205 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 ADALQ6DHV7 355 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 CCDC73Q6ZRK6 1079 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 PCDHA7Q9UN72 937 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 AFG3L2Q9Y4W6 797 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 PCDHB6Q9Y5E3 794 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 PCDHA1Q9Y5I3 950 aa15.8■□□□□ 0.12
PDLIM5-203ENST00000359265 CUTAO60888 179 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 NOM1Q5C9Z4 860 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 CCDC183Q5T5S1 534 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms