RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
SSU72-202ENST00000359060 FLT1P17948 1338 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 A0A1B0GTH6 734 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 ENC1O14682 589 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 TBCAO75347 108 aaKnown RBP12.48□□□□□ -0.41
SSU72-202ENST00000359060 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
SSU72-202ENST00000359060 NR1I3Q14994 352 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 CCDC66A2RUB6 948 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
SSU72-202ENST00000359060 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
SSU72-202ENST00000359060 IQCEQ6IPM2 695 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
SSU72-202ENST00000359060 AK8Q96MA6 479 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 ADD3Q9UEY8 706 aaKnown RBP12.47□□□□□ -0.41
SSU72-202ENST00000359060 FXR1P51114 621 aaKnown RBP eCLIP12.47□□□□□ -0.41
SSU72-202ENST00000359060 CLCN6P51797 869 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
SSU72-202ENST00000359060 CHMP2AO43633 222 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 TACC1O75410 805 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 GDF11O95390 407 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 PPP1R2P41236 205 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 ZNF384Q8TF68 577 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
SSU72-202ENST00000359060 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 STXBP3O00186 592 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.41
SSU72-202ENST00000359060 SNAP25P60880 206 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 MDM2Q00987 491 aaPredicted RBP12.46□□□□□ -0.41
SSU72-202ENST00000359060 SPICE1Q8N0Z3 855 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 TXLNBQ8N3L3 684 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 H0YIN7 160 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 TDP2O95551 362 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 MMP10P09238 476 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 HMGB2P26583 209 aaKnown RBP12.46□□□□□ -0.41
SSU72-202ENST00000359060 PRR16Q569H4 304 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 OGFOD1Q8N543 542 aa12.46□□□□□ -0.41
SSU72-202ENST00000359060 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.42
SSU72-202ENST00000359060 CCNE1P24864 410 aa12.46□□□□□ -0.42
SSU72-202ENST00000359060 EEF1GP26641 437 aaKnown RBP12.46□□□□□ -0.42
SSU72-202ENST00000359060 TTBK2Q6IQ55 1244 aa12.46□□□□□ -0.42
SSU72-202ENST00000359060 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.42
SSU72-202ENST00000359060 DHTKD1Q96HY7 919 aaPredicted RBP12.46□□□□□ -0.42
SSU72-202ENST00000359060 NUP58Q9BVL2 599 aa12.46□□□□□ -0.42
SSU72-202ENST00000359060 COA1Q9GZY4 146 aa12.46□□□□□ -0.42
SSU72-202ENST00000359060 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 FCER1AP12319 257 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 ADRA2BP18089 450 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
SSU72-202ENST00000359060 ICA1Q05084 483 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 RAD9BQ6WBX8 426 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 TAF4BQ92750 862 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 HINFPQ9BQA5 517 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 MRPL44Q9H9J2 332 aaKnown RBP12.45□□□□□ -0.42
SSU72-202ENST00000359060 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 KIAA1024Q9UPX6 916 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 CYP27A1Q02318 531 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 DCAF17Q5H9S7 520 aaPredicted RBP12.45□□□□□ -0.42
SSU72-202ENST00000359060 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
SSU72-202ENST00000359060 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 ABHD10Q9NUJ1 306 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
SSU72-202ENST00000359060 CFBP00751 764 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 PDE6BP35913 854 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 LMAN1P49257 510 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 FUT2Q10981 343 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 GPBP1Q86WP2 473 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 CDC23Q9UJX2 597 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
SSU72-202ENST00000359060 TTC26A0AVF1 554 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms