RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
APP-205ENST00000358918 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
APP-205ENST00000358918 IRF2BP1Q8IU81 584 aa16.01■□□□□ 0.15
APP-205ENST00000358918 STRBPQ96SI9 672 aaKnown RBP16.01■□□□□ 0.15
APP-205ENST00000358918 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
APP-205ENST00000358918 VCPKMTQ9H867 229 aa16.01■□□□□ 0.15
APP-205ENST00000358918 MCM8Q9UJA3 840 aa16.01■□□□□ 0.15
APP-205ENST00000358918 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
APP-205ENST00000358918 DUSP10Q9Y6W6 482 aa16.01■□□□□ 0.15
APP-205ENST00000358918 PDE8BO95263 885 aa16■□□□□ 0.15
APP-205ENST00000358918 PRCPP42785 496 aa16■□□□□ 0.15
APP-205ENST00000358918 PPARAQ07869 468 aa16■□□□□ 0.15
APP-205ENST00000358918 ACTN3Q08043 901 aaPredicted RBP16■□□□□ 0.15
APP-205ENST00000358918 PREPLQ4J6C6 727 aaPredicted RBP16■□□□□ 0.15
APP-205ENST00000358918 KCTD16Q68DU8 428 aa16■□□□□ 0.15
APP-205ENST00000358918 PDXDC2PQ6P474 469 aa16■□□□□ 0.15
APP-205ENST00000358918 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
APP-205ENST00000358918 TMTC2Q8N394 836 aa16■□□□□ 0.15
APP-205ENST00000358918 FANCBQ8NB91 859 aa16■□□□□ 0.15
APP-205ENST00000358918 ZNF507Q8TCN5 953 aa16■□□□□ 0.15
APP-205ENST00000358918 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 NUP58Q9BVL2 599 aa16■□□□□ 0.15
APP-205ENST00000358918 KLC4Q9NSK0 619 aa16■□□□□ 0.15
APP-205ENST00000358918 GDAQ9Y2T3 454 aa16■□□□□ 0.15
APP-205ENST00000358918 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 PRLRP16471 622 aa16■□□□□ 0.15
APP-205ENST00000358918 TRIM21P19474 475 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 ELF1P32519 619 aa16■□□□□ 0.15
APP-205ENST00000358918 NF2P35240 595 aa16■□□□□ 0.15
APP-205ENST00000358918 DNM2P50570 870 aa16■□□□□ 0.15
APP-205ENST00000358918 RCAN1P53805 252 aa16■□□□□ 0.15
APP-205ENST00000358918 SMTNP53814 917 aa16■□□□□ 0.15
APP-205ENST00000358918 SPA17Q15506 151 aa16■□□□□ 0.15
APP-205ENST00000358918 CCDC96Q2M329 555 aa16■□□□□ 0.15
APP-205ENST00000358918 EARS2Q5JPH6 523 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 IFNL3Q8IZI9 196 aa16■□□□□ 0.15
APP-205ENST00000358918 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
APP-205ENST00000358918 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
APP-205ENST00000358918 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
APP-205ENST00000358918 TDO2P48775 406 aa15.99■□□□□ 0.15
APP-205ENST00000358918 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
APP-205ENST00000358918 ZBED6P86452 979 aa15.99■□□□□ 0.15
APP-205ENST00000358918 CYP27A1Q02318 531 aa15.99■□□□□ 0.15
APP-205ENST00000358918 CCDC40Q4G0X9 1142 aa15.99■□□□□ 0.15
APP-205ENST00000358918 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
APP-205ENST00000358918 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
APP-205ENST00000358918 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
APP-205ENST00000358918 C8orf74Q6P047 294 aa15.99■□□□□ 0.15
APP-205ENST00000358918 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
APP-205ENST00000358918 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
APP-205ENST00000358918 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
APP-205ENST00000358918 THAP9Q9H5L6 903 aa15.99■□□□□ 0.15
APP-205ENST00000358918 EPB41L4AQ9HCS5 686 aaPredicted RBP15.99■□□□□ 0.15
APP-205ENST00000358918 LRWD1Q9UFC0 647 aa15.99■□□□□ 0.15
APP-205ENST00000358918 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
APP-205ENST00000358918 HYOU1Q9Y4L1 999 aa15.99■□□□□ 0.15
APP-205ENST00000358918 TRIM49BA6NDI0 452 aa15.99■□□□□ 0.15
APP-205ENST00000358918 PPP1R37O75864 691 aa15.99■□□□□ 0.15
APP-205ENST00000358918 SRGNP10124 158 aa15.99■□□□□ 0.15
APP-205ENST00000358918 TCP1P17987 556 aaKnown RBP15.99■□□□□ 0.15
APP-205ENST00000358918 CDR1P51861 262 aa15.99■□□□□ 0.15
APP-205ENST00000358918 PTGISQ16647 500 aa15.99■□□□□ 0.15
APP-205ENST00000358918 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
APP-205ENST00000358918 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
APP-205ENST00000358918 OSBPL9Q96SU4 736 aa15.99■□□□□ 0.15
APP-205ENST00000358918 AGPAT5Q9NUQ2 364 aa15.99■□□□□ 0.15
APP-205ENST00000358918 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
APP-205ENST00000358918 B4DLN1 442 aa15.98■□□□□ 0.15
APP-205ENST00000358918 SNAP23O00161 211 aa15.98■□□□□ 0.15
APP-205ENST00000358918 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
APP-205ENST00000358918 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
APP-205ENST00000358918 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
APP-205ENST00000358918 PTGDRQ13258 359 aa15.98■□□□□ 0.15
APP-205ENST00000358918 SMIM5Q71RC9 77 aa15.98■□□□□ 0.15
APP-205ENST00000358918 ADSSL1Q8N142 457 aa15.98■□□□□ 0.15
APP-205ENST00000358918 TRIM47Q96LD4 638 aa15.98■□□□□ 0.15
APP-205ENST00000358918 CCDC43Q96MW1 224 aaKnown RBP15.98■□□□□ 0.15
APP-205ENST00000358918 MTRQ99707 1265 aa15.98■□□□□ 0.15
APP-205ENST00000358918 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
APP-205ENST00000358918 TACC3Q9Y6A5 838 aa15.98■□□□□ 0.15
APP-205ENST00000358918 TCRBV5S4A2TA0A5A2 114 aa15.98■□□□□ 0.15
APP-205ENST00000358918 KRT14P02533 472 aa15.98■□□□□ 0.15
APP-205ENST00000358918 NR1D1P20393 614 aa15.98■□□□□ 0.15
APP-205ENST00000358918 DRP2Q13474 957 aa15.98■□□□□ 0.15
APP-205ENST00000358918 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
APP-205ENST00000358918 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
APP-205ENST00000358918 IFT20Q8IY31 132 aa15.98■□□□□ 0.15
APP-205ENST00000358918 CCDC13Q8IYE1 715 aa15.98■□□□□ 0.15
APP-205ENST00000358918 CCDC42Q96M95 316 aa15.98■□□□□ 0.15
APP-205ENST00000358918 PCMTD1Q96MG8 357 aaPredicted RBP15.98■□□□□ 0.15
APP-205ENST00000358918 ALS2CR12Q96Q35 445 aa15.98■□□□□ 0.15
APP-205ENST00000358918 TTYH3Q9C0H2 523 aa15.98■□□□□ 0.15
APP-205ENST00000358918 CENPHQ9H3R5 247 aa15.98■□□□□ 0.15
APP-205ENST00000358918 MYH7P12883 1935 aa15.97■□□□□ 0.15
APP-205ENST00000358918 TMCO5BA8MYB1 307 aa15.97■□□□□ 0.15
APP-205ENST00000358918 WNT7AO00755 349 aa15.97■□□□□ 0.15
APP-205ENST00000358918 NTSR2O95665 410 aa15.97■□□□□ 0.15
APP-205ENST00000358918 PHKA1P46020 1223 aa15.97■□□□□ 0.15
APP-205ENST00000358918 GLE1Q53GS7 698 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms