RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FYB2Q5VWT5 728 aa15.08■□□□□ 0
VCP-201ENST00000358901 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
VCP-201ENST00000358901 CACNA2D3Q8IZS8 1091 aa15.08■□□□□ 0
VCP-201ENST00000358901 FMR1NBQ8N0W7 255 aaPredicted RBP15.08■□□□□ 0
VCP-201ENST00000358901 PAGE5Q96GU1 130 aa15.08■□□□□ 0
VCP-201ENST00000358901 METTL14Q9HCE5 456 aaKnown RBP15.08■□□□□ 0
VCP-201ENST00000358901 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
VCP-201ENST00000358901 NLRP1Q9C000 1473 aa15.08■□□□□ 0
VCP-201ENST00000358901 BUB1BO60566 1050 aaPredicted RBP15.08■□□□□ 0
VCP-201ENST00000358901 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
VCP-201ENST00000358901 RETREG2Q8NC44 543 aa15.08■□□□□ 0
VCP-201ENST00000358901 MAGEF1Q9HAY2 307 aa15.08■□□□□ 0
VCP-201ENST00000358901 PLCB1Q9NQ66 1216 aa15.08■□□□□ 0
VCP-201ENST00000358901 DKC1O60832 514 aaKnown RBP eCLIP15.08■□□□□ 0
VCP-201ENST00000358901 NDUFA10O95299 355 aa15.08■□□□□ 0
VCP-201ENST00000358901 ZNF131P52739 623 aa15.08■□□□□ 0
VCP-201ENST00000358901 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0
VCP-201ENST00000358901 CFAP157Q5JU67 520 aa15.08■□□□□ 0
VCP-201ENST00000358901 GINS2Q9Y248 185 aa15.08■□□□□ 0
VCP-201ENST00000358901 KIF1BO60333 1816 aa15.07■□□□□ 0
VCP-201ENST00000358901 RNF40O75150 1001 aa15.07■□□□□ 0
VCP-201ENST00000358901 PTPREP23469 700 aa15.07■□□□□ 0
VCP-201ENST00000358901 CASP1P29466 404 aa15.07■□□□□ 0
VCP-201ENST00000358901 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 03e-7■■□□□ 12.4
VCP-201ENST00000358901 TBCKQ8TEA7 893 aa15.07■□□□□ 0
VCP-201ENST00000358901 SMCR8Q8TEV9 937 aaPredicted RBP15.07■□□□□ 0
VCP-201ENST00000358901 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
VCP-201ENST00000358901 LARSQ9P2J5 1176 aaKnown RBP15.07■□□□□ 0
VCP-201ENST00000358901 NR2F2P24468 414 aa15.07■□□□□ 0
VCP-201ENST00000358901 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
VCP-201ENST00000358901 PREX2Q70Z35 1606 aa15.07■□□□□ 0
VCP-201ENST00000358901 STX2P32856 288 aa15.07■□□□□ 0
VCP-201ENST00000358901 NEDD9Q14511 834 aa15.07■□□□□ 0
VCP-201ENST00000358901 PPM1KQ8N3J5 372 aa15.07■□□□□ 0
VCP-201ENST00000358901 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
VCP-201ENST00000358901 AK8Q96MA6 479 aa15.07■□□□□ 0
VCP-201ENST00000358901 PNPLA6Q8IY17 1366 aa15.07■□□□□ 0
VCP-201ENST00000358901 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
VCP-201ENST00000358901 TMEM232C9JQI7 657 aa15.06■□□□□ 0
VCP-201ENST00000358901 LAD1O00515 517 aa15.06■□□□□ 0
VCP-201ENST00000358901 CYP27B1O15528 508 aa15.06■□□□□ 0
VCP-201ENST00000358901 PRPF3O43395 683 aaKnown RBP15.06■□□□□ 0
VCP-201ENST00000358901 TBC1D8O95759 1140 aa15.06■□□□□ 0
VCP-201ENST00000358901 PPP2R5EQ16537 467 aa15.06■□□□□ 0
VCP-201ENST00000358901 FBXO11Q86XK2 927 aa15.06■□□□□ 0
VCP-201ENST00000358901 EPB41L5Q9HCM4 733 aa15.06■□□□□ 0
VCP-201ENST00000358901 HOMER3Q9NSC5 361 aa15.06■□□□□ 0
VCP-201ENST00000358901 PARP2Q9UGN5 583 aa15.06■□□□□ 0
VCP-201ENST00000358901 RWDD2AQ9UIY3 292 aa15.06■□□□□ 0
VCP-201ENST00000358901 HSPA1LP34931 641 aa15.06■□□□□ 0
VCP-201ENST00000358901 CLNS1AP54105 237 aaKnown RBP15.06■□□□□ 0
VCP-201ENST00000358901 ZBED6P86452 979 aa15.06■□□□□ 0
VCP-201ENST00000358901 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
VCP-201ENST00000358901 KRT31Q15323 416 aa15.06■□□□□ 0
VCP-201ENST00000358901 MAN2A1Q16706 1144 aa15.06■□□□□ 0
VCP-201ENST00000358901 GKAP1Q5VSY0 366 aaPredicted RBP15.06■□□□□ 0
VCP-201ENST00000358901 MIER3Q7Z3K6 550 aa15.06■□□□□ 0
VCP-201ENST00000358901 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
VCP-201ENST00000358901 PANX2Q96RD6 677 aa15.06■□□□□ 0
VCP-201ENST00000358901 HEXIM1O94992 359 aaKnown RBP15.06■□□□□ 0
VCP-201ENST00000358901 CCNE1P24864 410 aa15.06■□□□□ 0
VCP-201ENST00000358901 SLFN13Q68D06 897 aa15.06■□□□□ 0
VCP-201ENST00000358901 TBC1D10CQ8IV04 446 aa15.06■□□□□ 0
VCP-201ENST00000358901 SLFN12Q8IYM2 578 aa15.06■□□□□ 0
VCP-201ENST00000358901 LARGE2Q8N3Y3 721 aa15.06■□□□□ 0
VCP-201ENST00000358901 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
VCP-201ENST00000358901 VPS37BQ9H9H4 285 aa15.06■□□□□ 0
VCP-201ENST00000358901 TMEM94Q12767 1356 aa15.06■□□□□ 0
VCP-201ENST00000358901 MCUR1Q96AQ8 359 aa15.06■□□□□ 0
VCP-201ENST00000358901 DCAF8L1A6NGE4 600 aa15.05■□□□□ 0
VCP-201ENST00000358901 USP27XA6NNY8 438 aa15.05■□□□□ 0
VCP-201ENST00000358901 PLEKHA8P1O95397 391 aa15.05■□□□□ 0
VCP-201ENST00000358901 USP17L8P0C7I0 530 aa15.05■□□□□ 0
VCP-201ENST00000358901 ICA1Q05084 483 aa15.05■□□□□ 0
VCP-201ENST00000358901 DOK7Q18PE1 504 aa15.05■□□□□ 0
VCP-201ENST00000358901 CERKLQ49MI3 558 aaPredicted RBP15.05■□□□□ 0
VCP-201ENST00000358901 RESP18Q5W5W9 173 aa15.05■□□□□ 0
VCP-201ENST00000358901 GDAQ9Y2T3 454 aa15.05■□□□□ 0
VCP-201ENST00000358901 ABCC12Q96J65 1359 aa15.05■□□□□ 0
VCP-201ENST00000358901 WDR17Q8IZU2 1322 aa15.05■□□□□ -0
VCP-201ENST00000358901 ATP2B4P23634 1241 aa15.05■□□□□ -0
VCP-201ENST00000358901 PSMC4P43686 418 aa15.05■□□□□ -0
VCP-201ENST00000358901 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
VCP-201ENST00000358901 CASP8Q14790 479 aa15.05■□□□□ -0
VCP-201ENST00000358901 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
VCP-201ENST00000358901 IWS1Q96ST2 819 aa15.05■□□□□ -0
VCP-201ENST00000358901 MFAP3LO75121 409 aa15.04■□□□□ -0
VCP-201ENST00000358901 EIF4A3P38919 411 aaKnown RBP15.04■□□□□ -0
VCP-201ENST00000358901 RASA3Q14644 834 aa15.04■□□□□ -0
VCP-201ENST00000358901 DYNLL2Q96FJ2 89 aa15.04■□□□□ -0
VCP-201ENST00000358901 ABCB6Q9NP58 842 aa15.04■□□□□ -0
VCP-201ENST00000358901 PICK1Q9NRD5 415 aa15.04■□□□□ -0
VCP-201ENST00000358901 PLCG1P19174 1290 aa15.04■□□□□ -0
VCP-201ENST00000358901 KCNQ4P56696 695 aa15.04■□□□□ -0
VCP-201ENST00000358901 DLGAP5Q15398 846 aa15.04■□□□□ -0
VCP-201ENST00000358901 NLRX1Q86UT6 975 aa15.04■□□□□ -0
VCP-201ENST00000358901 SYNE4Q8N205 404 aa15.04■□□□□ -0
VCP-201ENST00000358901 PIGSQ96S52 555 aa15.04■□□□□ -0
VCP-201ENST00000358901 K7ENM7 598 aa15.04■□□□□ -0
VCP-201ENST00000358901 SEMA3EO15041 775 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms