RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LDHCP07864 332 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 RHOXF2BP0C7M4 288 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CYP2C19P33261 490 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 BTDP43251 543 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 PPP4CP60510 307 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 ASIC1P78348 528 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 PDE4DQ08499 809 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 NONOQ15233 471 aaKnown RBP eCLIP9.63□□□□□ -0.87
RFX3-202ENST00000358730 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 ZNF507Q8TCN5 953 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CCDC47Q96A33 483 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 AK8Q96MA6 479 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 RHOXF2Q9BQY4 288 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 SPZ1Q9BXG8 430 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 SEC63Q9UGP8 760 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 ZBTB22O15209 634 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 TRIM21P19474 475 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 DNM2P50570 870 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 NOC3LQ8WTT2 800 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 DHTKD1Q96HY7 919 aaPredicted RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 TUBGCP2Q9BSJ2 902 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 MYO6Q9UM54 1294 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CAPN11Q9UMQ6 739 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 SMCO2A6NFE2 343 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 ERLIN1O75477 346 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 GNA11P29992 359 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 CDK8P49336 464 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 NCAPH2Q6IBW4 605 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 NEK8Q86SG6 692 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 TEX11Q8IYF3 940 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 P2RX5Q93086 422 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 RRP36Q96EU6 259 aaKnown RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 CNOT6LQ96LI5 555 aaKnown RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 DUSP9Q99956 384 aaKnown RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 C6orf50Q9HD87 102 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 SRGNP10124 158 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 RFC4P35249 363 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 TUBB4BP68371 445 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 AMPD2Q01433 879 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 SEMA3FQ13275 785 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 TAF3Q5VWG9 929 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 WDR59Q6PJI9 974 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 C16orf86Q6ZW13 317 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 VAT1LQ9HCJ6 419 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.62□□□□□ -0.87
RFX3-202ENST00000358730 RAB21Q9UL25 225 aa9.62□□□□□ -0.87
RFX3-202ENST00000358730 CCNE1P24864 410 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 TECP42680 631 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 HERVK_113P62684 666 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 STK4Q13043 487 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 MCM6Q14566 821 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 BEND6Q5SZJ8 279 aaPredicted RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 CCDC122Q5T0U0 273 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 KIAA1328Q86T90 577 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 TBCKQ8TEA7 893 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 HNRNPLLQ8WVV9 542 aaKnown RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 CEP95Q96GE4 821 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 C8orf37Q96NL8 207 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 HAUS4Q9H6D7 363 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 TFR2Q9UP52 801 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 ENC1O14682 589 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 MAP2K7O14733 419 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 UFL1O94874 794 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 FCER1AP12319 257 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 KLK7P49862 253 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 VSNL1P62760 191 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 TBC1D8BQ0IIM8 1120 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 POTEDQ86YR6 584 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 FAM114A1Q8IWE2 563 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 REXO1Q8N1G1 1221 aaKnown RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 NOA1Q8NC60 698 aaKnown RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 PIGSQ96S52 555 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 AGPAT5Q9NUQ2 364 aa9.61□□□□□ -0.87
RFX3-202ENST00000358730 ZNHIT6Q9NWK9 470 aaKnown RBP9.61□□□□□ -0.87
RFX3-202ENST00000358730 H3BQF6 201 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 PSMD14O00487 310 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 IPO7O95373 1038 aaKnown RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 KRT83P78385 493 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 ST5P78524 1137 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 FAM182BQ5T319 152 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 ANKRD40Q6AI12 368 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 NEDD1Q8NHV4 660 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 RPGRQ92834 1020 aaKnown RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 CALML4Q96GE6 196 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 C7orf25Q9BPX7 421 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 TTYH3Q9C0H2 523 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 BIN2Q9UBW5 565 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms