RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 HAUS3Q68CZ6 603 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 CACNA2D4Q7Z3S7 1137 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 PROCA1Q8NCQ7 364 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 TAF4BQ92750 862 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 HMGB1P1B2RPK0 211 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 DNM1LO00429 736 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 MYBL1P10243 752 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 ANKS4BQ8N8V4 417 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 CTDP1Q9Y5B0 961 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 EYA2O00167 538 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 GLI1P08151 1106 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 PRCPP42785 496 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 RASSF7Q02833 373 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 PLCB4Q15147 1175 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 SPAG5Q96R06 1193 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 ATP6V0A4Q9HBG4 840 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 ARID5AQ03989 594 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 YTHDF3Q7Z739 585 aaKnown RBP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 H7C1D1 291 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 DEXIO95424 95 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 MRPL12P52815 198 aaKnown RBP12.65□□□□□ -0.38
CNOT3-202ENST00000358389 ANKRD20A8PQ5CZ79 823 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
CNOT3-202ENST00000358389 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.39
CNOT3-202ENST00000358389 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 FTCDO95954 541 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 RPN1P04843 607 aaKnown RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 EPB41P11171 864 aaKnown RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 DNM2P50570 870 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 DRP2Q13474 957 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 WLSQ5T9L3 541 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 PARD3BQ8TEW8 1205 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 FOXP1Q9H334 677 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 LGALS16A8MUM7 142 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 PTGDRQ13258 359 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 EME2A4GXA9 379 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 DIAPH2O60879 1101 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 QPCTQ16769 361 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 TRIM31Q9BZY9 425 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 GGT7Q9UJ14 662 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 KCNA6P17658 529 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 KRT2P35908 639 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 SCARF1Q14162 830 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 RRAGAQ7L523 313 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
CNOT3-202ENST00000358389 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-202ENST00000358389 SPRED3Q2MJR0 410 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 CUL5Q93034 780 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 CLTCQ00610 1675 aaKnown RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 CTNND1O60716 968 aaKnown RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 ANP32DO95626 131 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 EHHADHQ08426 723 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 TRADDQ15628 312 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 RUFY4Q6ZNE9 571 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 CCDC170Q8IYT3 715 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 UTYO14607 1347 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 MAGOHP61326 146 aaKnown RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 ZBED6P86452 979 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms