RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 EPB42P16452 691 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 FBLN1P23142 703 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 IFNA8P32881 189 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 RFX3P48380 749 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 EHHADHQ08426 723 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 ANKRD36BP1Q96IX9 119 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CSRNP1Q96S65 589 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CASS4Q9NQ75 786 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 NRBP2Q9NSY0 501 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CUX1P39880 1505 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 P4HA2O15460 535 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 DNAJC6O75061 913 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 FOSP01100 380 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 GNAT2P19087 354 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 EEF1B2P24534 225 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 BPIFB4P59827 614 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 STX1BP61266 288 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TFDP1Q14186 410 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 MCMDC2Q4G0Z9 681 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 NBPF11Q86T75 865 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 C10orf67Q8IYJ2 551 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 COA7Q96BR5 231 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 FAM89AQ96GI7 184 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 PCDHB4Q9Y5E5 795 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 KRT87PA6NCN2 255 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 DMP1Q13316 513 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 FLOT2Q14254 428 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SMAD1Q15797 465 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 STXBP2Q15833 593 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TRIM67Q6ZTA4 783 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SIX6OS1Q8N1H7 587 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TRIML2Q8N7C3 387 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 MKL2Q9ULH7 1088 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 B4E1Z4 1266 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 NUDT18Q6ZVK8 323 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 RAD17O75943 681 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ADCY8P40145 1251 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 MAPK9P45984 424 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ERFEQ4G0M1 354 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ANKRD20A3Q5VUR7 823 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 TEKT1Q969V4 418 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 RSRC1Q96IZ7 334 aaKnown RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 IFT122Q9HBG6 1241 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 DDX19AQ9NUU7 478 aaKnown RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 SERTAD1Q9UHV2 236 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 THAP12O43422 761 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ACTN4O43707 911 aaKnown RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 YWHAGP61981 247 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ASPHQ12797 758 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 BFSP1Q12934 665 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 RCN2Q14257 317 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 IMPG1Q17R60 797 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 LVRNQ6Q4G3 990 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ZSCAN30Q86W11 494 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ARHGAP24Q8N264 748 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 U2AF1L4Q8WU68 220 aaKnown RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 HAUS1Q96CS2 278 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ASIC4Q96FT7 647 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 POLR3CQ9BUI4 534 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 HPCAL4Q9UM19 191 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 SGK1O00141 431 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 POLR2MP0CAP2 368 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ARHGAP4P98171 946 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 MECOMQ03112 1051 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 LONRF2Q1L5Z9 754 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 KIF19Q2TAC6 998 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 TJAP1Q5JTD0 557 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 CEP128Q6ZU80 1094 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 IFT43Q96FT9 208 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 GBP5Q96PP8 586 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 LRRC4Q9HBW1 653 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 TPCN1Q9ULQ1 816 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 KCNH4Q9UQ05 1017 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 HIP1RO75146 1068 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 GPR1P46091 355 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 PRIM1P49642 420 aaKnown RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 VAV2P52735 878 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 PDE1BQ01064 536 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ALFQ53S48 1182 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 ITPRIPL1Q6GPH6 555 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 FBXO11Q86XK2 927 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 EFCAB13Q8IY85 973 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 TRPC5Q9UL62 973 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 GTF2A1LQ9UNN4 478 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRCA1-203ENST00000357654 NSD3Q9BZ95 1437 aa6.32□□□□□ -1.4
BRCA1-203ENST00000357654 GOLGA8SH3BPF8 625 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 XPOTO43592 962 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 PRR29P0C7W0 189 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SRGAP2CP0DJJ0 459 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ITGA6P23229 1130 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 KRT17Q04695 432 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 CNNM4Q6P4Q7 775 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NUDCD3Q8IVD9 361 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 THEM5Q8N1Q8 247 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 C10orf53Q8N6V4 93 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms