RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 ERCC3P19447 782 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 AK2P54819 239 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 WDR78Q5VTH9 848 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 SNRNP48Q6IEG0 339 aaKnown RBP18.68■□□□□ 0.58
COPS7B-202ENST00000357490 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 TRIB2Q92519 343 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 TEX13BQ9BXU2 312 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 RIOX1Q9H6W3 641 aa18.68■□□□□ 0.58
COPS7B-202ENST00000357490 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
COPS7B-202ENST00000357490 FRMPD3Q5JV73 1810 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 PDIA3P30101 505 aaKnown RBP18.67■□□□□ 0.58
COPS7B-202ENST00000357490 CDC27P30260 824 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 OAZ1P54368 228 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 CDC37Q16543 378 aaPredicted RBP18.67■□□□□ 0.58
COPS7B-202ENST00000357490 RTN1Q16799 776 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 NECAB2Q7Z6G3 386 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 NCAPG2Q86XI2 1143 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
COPS7B-202ENST00000357490 APBA2Q99767 749 aa18.67■□□□□ 0.58
COPS7B-202ENST00000357490 RANBP2P49792 3224 aaKnown RBP18.67■□□□□ 0.58
COPS7B-202ENST00000357490 SMCHD1A6NHR9 2005 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 EVI5O60447 810 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 SLC25A27O95847 323 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 ICAM1P05362 532 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 GNAQP50148 359 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
COPS7B-202ENST00000357490 RCAN1P53805 252 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 MORN1Q5T089 497 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 MAP3K21Q5TCX8 1036 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 SHCBP1Q8NEM2 672 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 USP6NLQ92738 828 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 MTMR8Q96EF0 704 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
COPS7B-202ENST00000357490 BAZ2BQ9UIF8 2168 aaKnown RBP18.66■□□□□ 0.58
COPS7B-202ENST00000357490 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 ADD1P35611 737 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 TRIM32Q13049 653 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 QRICH1Q2TAL8 776 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 HOMER1Q86YM7 354 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 PAWRQ96IZ0 340 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 PIGSQ96S52 555 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 LZTS2Q9BRK4 669 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 MROH8Q9H579 483 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
COPS7B-202ENST00000357490 CCPG1Q9ULG6 757 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 ZNF236Q9UL36 1845 aa18.65■□□□□ 0.58
COPS7B-202ENST00000357490 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.58
COPS7B-202ENST00000357490 ALAS1P13196 640 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 SMARCA1P28370 1054 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 MAP2K5Q13163 448 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 STK3Q13188 491 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 SPZ1Q9BXG8 430 aa18.64■□□□□ 0.57
COPS7B-202ENST00000357490 NCOA5Q9HCD5 579 aaKnown RBP18.64■□□□□ 0.57
COPS7B-202ENST00000357490 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 ZBTB5O15062 677 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
COPS7B-202ENST00000357490 PTPREP23469 700 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 COPB2P35606 906 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
COPS7B-202ENST00000357490 RABEP1Q15276 862 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 USH1GQ495M9 461 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 NID2Q14112 1375 aa18.63■□□□□ 0.57
COPS7B-202ENST00000357490 MYH6P13533 1939 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 CACNB2Q08289 660 aaPredicted RBP18.62■□□□□ 0.57
COPS7B-202ENST00000357490 FUT2Q10981 343 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 FBXO11Q86XK2 927 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 CHST13Q8NET6 341 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 RNF146Q9NTX7 359 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 OGDHLQ9ULD0 1010 aa18.62■□□□□ 0.57
COPS7B-202ENST00000357490 CNTNAP5Q8WYK1 1306 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 STRNO43815 780 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 PPFIA3O75145 1194 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 LARGE1O95461 756 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 FCER1AP12319 257 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 GRB14Q14449 540 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 ME3Q16798 604 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 TKFCQ3LXA3 575 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 DIS3LQ8TF46 1054 aaKnown RBP18.61■□□□□ 0.57
COPS7B-202ENST00000357490 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
COPS7B-202ENST00000357490 MMP19Q99542 508 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 ACAD9Q9H845 621 aa18.61■□□□□ 0.57
COPS7B-202ENST00000357490 ADORA2AP29274 412 aa18.6■□□□□ 0.57
COPS7B-202ENST00000357490 SCRN1Q12765 414 aa18.6■□□□□ 0.57
COPS7B-202ENST00000357490 NTRK3Q16288 839 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms