RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 EPB41L5Q9HCM4 733 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 COPRSQ9NQ92 184 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 DBN1Q16643 649 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 PRR16Q569H4 304 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 RNF168Q8IYW5 571 aaPredicted RBP16.23■□□□□ 0.19
CHD4-201ENST00000357008 CLCN6P51797 869 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 RNASELQ05823 741 aaKnown RBP16.23■□□□□ 0.19
CHD4-201ENST00000357008 KRT81Q14533 505 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.23■□□□□ 0.19
CHD4-201ENST00000357008 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 NLRX1Q86UT6 975 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 IL17REQ8NFR9 667 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 SPZ1Q9BXG8 430 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 LMNB2Q03252 620 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 BFSP1Q12934 665 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 DEPTORQ8TB45 409 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 ST7Q9NRC1 585 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
CHD4-201ENST00000357008 SATB1Q01826 763 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 NAA35Q5VZE5 725 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 ZNF148Q9UQR1 794 aa16.23■□□□□ 0.19
CHD4-201ENST00000357008 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 STAM2O75886 525 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 ENOX1Q8TC92 643 aaKnown RBP16.22■□□□□ 0.19
CHD4-201ENST00000357008 CHURC1Q8WUH1 139 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 MAGOHBQ96A72 148 aaKnown RBP16.22■□□□□ 0.19
CHD4-201ENST00000357008 DAAM1Q9Y4D1 1078 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 IFNAR2P48551 515 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 ZMYM1Q5SVZ6 1142 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 CAPN12Q6ZSI9 719 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
CHD4-201ENST00000357008 PEX19P40855 299 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.193e-6■□□□□ 10.4
CHD4-201ENST00000357008 FAM170AA1A519 330 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 CYP21A2P08686 494 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 AOC3Q16853 763 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 VSTM4Q8IW00 320 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 PPM1KQ8N3J5 372 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 CCDC93Q567U6 631 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 BRDTQ58F21 947 aaPredicted RBP16.22■□□□□ 0.19
CHD4-201ENST00000357008 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
CHD4-201ENST00000357008 H0YCG3 227 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 K7ENM7 598 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 COG7P83436 770 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 FMNL1O95466 1100 aaPredicted RBP16.21■□□□□ 0.19
CHD4-201ENST00000357008 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 FNBP4Q8N3X1 1017 aaPredicted RBP16.21■□□□□ 0.19
CHD4-201ENST00000357008 P2RX5Q93086 422 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 TTLL3Q9Y4R7 772 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 HSP90AA5PQ58FG0 334 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 FAM102BQ5T8I3 360 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
CHD4-201ENST00000357008 HVCN1Q96D96 273 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 MIS12Q9H081 205 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 ZMYND10O75800 440 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 SLFN14P0C7P3 912 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
CHD4-201ENST00000357008 NXNQ6DKJ4 435 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 AK8Q96MA6 479 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 TRIM4Q9C037 500 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 GPR108Q9NPR9 543 aa16.21■□□□□ 0.19
CHD4-201ENST00000357008 PGRMC1O00264 195 aaKnown RBP16.21■□□□□ 0.18
CHD4-201ENST00000357008 CNGA1P29973 690 aa16.21■□□□□ 0.18
CHD4-201ENST00000357008 GABPAQ06546 454 aa16.21■□□□□ 0.18
CHD4-201ENST00000357008 BANK1Q8NDB2 785 aa16.21■□□□□ 0.18
CHD4-201ENST00000357008 CNOT10Q9H9A5 744 aaKnown RBP16.21■□□□□ 0.18
CHD4-201ENST00000357008 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.18
CHD4-201ENST00000357008 PPP1R9AQ9ULJ8 1098 aa16.21■□□□□ 0.18
CHD4-201ENST00000357008 POLR2BP30876 1174 aaKnown RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 ZNF658Q5TYW1 1059 aaPredicted RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 ALS2CLQ60I27 953 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 MAN1B1Q9UKM7 699 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.189e-10■□□□□ 8.5
CHD4-201ENST00000357008 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 SART1O43290 800 aaKnown RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 NSFP46459 744 aaKnown RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 LIG4P49917 911 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 TCP10Q12799 353 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 MAN2A1Q16706 1144 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 TCP11Q8WWU5 503 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 ACTR5Q9H9F9 607 aaPredicted RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 MYL1P05976 194 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 TPX2Q9ULW0 747 aaKnown RBP16.2■□□□□ 0.18
CHD4-201ENST00000357008 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 ANKRD35Q8N283 1001 aa16.2■□□□□ 0.18
CHD4-201ENST00000357008 ZBTB38Q8NAP3 1195 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms