RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 CEP104O60308 925 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 MAP2K1Q02750 393 aaPredicted RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 EHHADHQ08426 723 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 PUM3Q15397 648 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 PDE8AO60658 829 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 MYZAPP0CAP1 466 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 NBPF10Q6P3W6 841 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 FTCDO95954 541 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 EIF4A3P38919 411 aaKnown RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 TNNC1P63316 161 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 CPDO75976 1380 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 PDE8BO95263 885 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 CALML3P27482 149 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 INF2Q27J81 1249 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
BDNF-202ENST00000356660 LACRTQ9GZZ8 138 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 DMGDHQ9UI17 866 aaKnown RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 TRAF5O00463 557 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 NR1D1P20393 614 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 TNNI2P48788 182 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 SEC24CP53992 1094 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
BDNF-202ENST00000356660 STIM2Q9P246 746 aa13.89□□□□□ -0.19
BDNF-202ENST00000356660 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 CYP27B1O15528 508 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 KRT71Q3SY84 523 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 LPIN2Q92539 896 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 N4BP2L2Q92802 583 aaPredicted RBP13.88□□□□□ -0.19
BDNF-202ENST00000356660 VIPAS39Q9H9C1 493 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 CDHR2Q9BYE9 1310 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 CTNNA1P35221 906 aaKnown RBP13.88□□□□□ -0.19
BDNF-202ENST00000356660 KLK7P49862 253 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 TBC1D7Q9P0N9 293 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 SEMA3EO15041 775 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 EIF3HO15372 352 aaKnown RBP eCLIP13.88□□□□□ -0.19
BDNF-202ENST00000356660 GYG1P46976 350 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 SATB1Q01826 763 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 ARL8AQ96BM9 186 aa13.88□□□□□ -0.19
BDNF-202ENST00000356660 ZC3H12CQ9C0D7 883 aaKnown RBP13.88□□□□□ -0.19
BDNF-202ENST00000356660 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 USP17L21D6R901 530 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 CALM1P0DP23 149 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 CALM2P0DP24 149 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 CALM3P0DP25 149 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 TXKP42681 527 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 A6NNZ2 444 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 KCNK3O14649 394 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 ZBED6P86452 979 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 DPYDQ12882 1025 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 TUBB8Q3ZCM7 444 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 SGMS1Q86VZ5 419 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 RNF225M0QZC1 329 aaPredicted RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 SYF2O95926 243 aaKnown RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 VIMP08670 466 aaKnown RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 PPP1R7Q15435 360 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 PCDHA13Q9Y5I0 950 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 A0A087X0B3 334 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 MYBL2P10244 700 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 KIF11P52732 1056 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 NTRK3Q16288 839 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 CABP7Q86V35 215 aa13.87□□□□□ -0.19
BDNF-202ENST00000356660 UHMK1Q8TAS1 419 aaKnown RBP13.87□□□□□ -0.19
BDNF-202ENST00000356660 PREX1Q8TCU6 1659 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 A0A1B0GUA9 196 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 APBA1Q02410 837 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 VEZTQ9HBM0 779 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 SLC9C1Q4G0N8 1177 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 CD248Q9HCU0 757 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 LIMA1Q9UHB6 759 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms