RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PDS5AQ29RF7 1337 aaKnown RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 PSMA7O14818 248 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 KLRC4O43908 158 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 PDE4DQ08499 809 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 TTMPQ5BVD1 217 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 IFIH1Q9BYX4 1025 aaKnown RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 SLC39A2Q9NP94 309 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 CHD4Q14839 1912 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 BMP15O95972 392 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 ASIC1P78348 528 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 SPA17Q15506 151 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 DTHD1Q6ZMT9 781 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 NID2Q14112 1375 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 A0A087WUV0 522 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 FAM153BP0C7A2 387 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 SRGNP10124 158 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 CYP19A1P11511 503 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 DNM2P50570 870 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 MNAT1P51948 309 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 FAM153CQ494X1 144 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 ARHGAP20Q9P2F6 1191 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 FAM153AQ9UHL3 310 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 PACSIN2Q9UNF0 486 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
PTPRA-203ENST00000356147 GRIN2DO15399 1336 aa11.3□□□□□ -0.6
PTPRA-203ENST00000356147 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 MYO1FO00160 1098 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 AKR1B10O60218 316 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 GUCY1A3Q02108 690 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 RUFY1Q96T51 708 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 TTYH3Q9C0H2 523 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 PLCG1P19174 1290 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 GUCY2CP25092 1073 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 MCM3P25205 808 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 KLRK1P26718 216 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 VAV2P52735 878 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 RASSF7Q02833 373 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 DNAAF5Q86Y56 855 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 CAPN7Q9Y6W3 813 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 BCL9LQ86UU0 1499 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 COL18A1P39060 1754 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 EEF1GP26641 437 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 CARSP49589 748 aaKnown RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 SEC24CP53992 1094 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 ARID5AQ03989 594 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
PTPRA-203ENST00000356147 SF3A3Q12874 501 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■■□□ 18.6
PTPRA-203ENST00000356147 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 RRAGAQ7L523 313 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 NLRC4Q9NPP4 1024 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
PTPRA-203ENST00000356147 A0A1W2PQC6 194 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 BACH1O14867 736 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 EIF3HO15372 352 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRA-203ENST00000356147 KIF11P52732 1056 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 ZBED6P86452 979 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
PTPRA-203ENST00000356147 MEA1Q16626 185 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
PTPRA-203ENST00000356147 TACC1O75410 805 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 INPP5BP32019 993 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 LRRC41Q15345 812 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
PTPRA-203ENST00000356147 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
PTPRA-203ENST00000356147 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 GLIS3Q8NEA6 775 aa11.28□□□□□ -0.6
PTPRA-203ENST00000356147 P2RX5Q93086 422 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms