RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 BLIDQ8IZY5 108 aa27.61■■■□□ 2.01
CHKA-202ENST00000356135 C6orf50Q9HD87 102 aa27.61■■■□□ 2.01
CHKA-202ENST00000356135 ZNF214Q9UL59 606 aaPredicted RBP27.61■■■□□ 2.01
CHKA-202ENST00000356135 RIPK3Q9Y572 518 aa27.61■■■□□ 2.01
CHKA-202ENST00000356135 MANSC4A6NHS7 340 aaPredicted RBP27.6■■■□□ 2.01
CHKA-202ENST00000356135 OPLAHO14841 1288 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 FDX1P10109 184 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 GNL2Q13823 731 aaKnown RBP27.6■■■□□ 2.01
CHKA-202ENST00000356135 PLS1Q14651 629 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 EARS2Q5JPH6 523 aaKnown RBP27.6■■■□□ 2.01
CHKA-202ENST00000356135 LBX2Q6XYB7 198 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 GOLGA6L22H0YM25 854 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 ALAS1P13196 640 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 CALML3P27482 149 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 DEFB115Q30KQ5 88 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 PPP1R18Q6NYC8 613 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 TBC1D5Q92609 795 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 PSTPIP2Q9H939 334 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 HOMER2Q9NSB8 354 aa27.6■■■□□ 2.01
CHKA-202ENST00000356135 COL11A1P12107 1806 aaPredicted RBP27.59■■■□□ 2.01
CHKA-202ENST00000356135 IGF2BP3O00425 579 aaKnown RBP eCLIP27.59■■■□□ 2.01
CHKA-202ENST00000356135 U2AF2P26368 475 aaKnown RBP eCLIP27.59■■■□□ 2.011e-6■□□□□ 10.8
CHKA-202ENST00000356135 ADCY7P51828 1080 aa27.59■■■□□ 2.01
CHKA-202ENST00000356135 UBE2SQ16763 222 aa27.59■■■□□ 2.01
CHKA-202ENST00000356135 PAGR1Q9BTK6 254 aa27.59■■■□□ 2.01
CHKA-202ENST00000356135 FOXP1Q9H334 677 aaPredicted RBP27.59■■■□□ 2.01
CHKA-202ENST00000356135 TMEM260Q9NX78 707 aa27.59■■■□□ 2.01
CHKA-202ENST00000356135 BIN2Q9UBW5 565 aaPredicted RBP27.59■■■□□ 2.01
CHKA-202ENST00000356135 ESYT2A0FGR8 921 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 FAM205CA6NFA0 338 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 M0R2N6 131 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 GNA11P29992 359 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 SNRNP48Q6IEG0 339 aaKnown RBP27.58■■■□□ 2.01
CHKA-202ENST00000356135 ZSCAN16Q9H4T2 348 aaPredicted RBP27.58■■■□□ 2.01
CHKA-202ENST00000356135 TXNRD2Q9NNW7 524 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 RIC8AQ9NPQ8 531 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 RBPJLQ9UBG7 517 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 PCDHA6Q9UN73 950 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 PCDHA8Q9Y5H6 950 aa27.58■■■□□ 2.01
CHKA-202ENST00000356135 CNMDO75829 334 aa27.58■■■□□ 2
CHKA-202ENST00000356135 MUM1L1Q5H9M0 696 aa27.58■■■□□ 2
CHKA-202ENST00000356135 USP17L6PQ6QN14 398 aa27.58■■■□□ 2
CHKA-202ENST00000356135 DAGLBQ8NCG7 672 aa27.58■■■□□ 2
CHKA-202ENST00000356135 TNFRSF25Q93038 417 aa27.58■■■□□ 2
CHKA-202ENST00000356135 BRMS1Q9HCU9 246 aa27.58■■■□□ 2
CHKA-202ENST00000356135 PNMA3Q9UL41 463 aa27.58■■■□□ 2
CHKA-202ENST00000356135 SLC45A1Q9Y2W3 748 aa27.58■■■□□ 2
CHKA-202ENST00000356135 TCHHQ07283 1943 aa27.57■■■□□ 2
CHKA-202ENST00000356135 RASSF10A6NK89 507 aa27.57■■■□□ 2
CHKA-202ENST00000356135 AOC2O75106 756 aa27.57■■■□□ 2
CHKA-202ENST00000356135 JAKMIP3Q5VZ66 844 aa27.57■■■□□ 2
CHKA-202ENST00000356135 GALNT17Q6IS24 598 aa27.57■■■□□ 2
CHKA-202ENST00000356135 MRPL11Q9Y3B7 192 aaKnown RBP27.57■■■□□ 2
CHKA-202ENST00000356135 ABCB11O95342 1321 aa27.57■■■□□ 2
CHKA-202ENST00000356135 STAT3P40763 770 aa27.56■■■□□ 2
CHKA-202ENST00000356135 Q3C1V9 767 aa27.56■■■□□ 2
CHKA-202ENST00000356135 NOSTRINQ8IVI9 506 aa27.56■■■□□ 2
CHKA-202ENST00000356135 FAM177A1Q8N128 213 aaPredicted RBP27.56■■■□□ 2
CHKA-202ENST00000356135 CLEC4DQ8WXI8 215 aa27.56■■■□□ 2
CHKA-202ENST00000356135 CUL5Q93034 780 aa27.56■■■□□ 2
CHKA-202ENST00000356135 NFIBO00712 420 aa27.55■■■□□ 2
CHKA-202ENST00000356135 MEIS2O14770 477 aa27.55■■■□□ 2
CHKA-202ENST00000356135 MRPL12P52815 198 aaKnown RBP27.55■■■□□ 2
CHKA-202ENST00000356135 OAZ1P54368 228 aa27.55■■■□□ 2
CHKA-202ENST00000356135 TRAF1Q13077 416 aa27.55■■■□□ 2
CHKA-202ENST00000356135 SMCR8Q8TEV9 937 aaPredicted RBP27.55■■■□□ 2
CHKA-202ENST00000356135 PGBD1Q96JS3 809 aa27.55■■■□□ 2
CHKA-202ENST00000356135 TRERF1Q96PN7 1200 aa27.55■■■□□ 2
CHKA-202ENST00000356135 TEX13BQ9BXU2 312 aa27.55■■■□□ 2
CHKA-202ENST00000356135 ATP2A1O14983 1001 aa27.55■■■□□ 2
CHKA-202ENST00000356135 HOXA13P31271 388 aaPredicted RBP27.55■■■□□ 2
CHKA-202ENST00000356135 DNM1Q05193 864 aaKnown RBP27.55■■■□□ 2
CHKA-202ENST00000356135 PIK3AP1Q6ZUJ8 805 aa27.55■■■□□ 2
CHKA-202ENST00000356135 IFNL1Q8IU54 200 aa27.55■■■□□ 2
CHKA-202ENST00000356135 CAPNS2Q96L46 248 aa27.55■■■□□ 2
CHKA-202ENST00000356135 CFBP00751 764 aa27.54■■■□□ 2
CHKA-202ENST00000356135 MB21D1Q8N884 522 aa27.54■■■□□ 2
CHKA-202ENST00000356135 R3HDMLQ9H3Y0 253 aa27.54■■■□□ 2
CHKA-202ENST00000356135 ATP6V1DQ9Y5K8 247 aa27.54■■■□□ 2
CHKA-202ENST00000356135 CLK2P49760 499 aaKnown RBP27.53■■■□□ 2
CHKA-202ENST00000356135 REXO1Q8N1G1 1221 aaKnown RBP27.53■■■□□ 2
CHKA-202ENST00000356135 BICD2Q8TD16 824 aa27.53■■■□□ 2
CHKA-202ENST00000356135 SPATC1LQ9H0A9 340 aa27.53■■■□□ 2
CHKA-202ENST00000356135 RNF146Q9NTX7 359 aa27.53■■■□□ 2
CHKA-202ENST00000356135 TFIP11Q9UBB9 837 aaKnown RBP27.53■■■□□ 2
CHKA-202ENST00000356135 A0A0G2JMZ2 1700 aa27.53■■■□□ 2
CHKA-202ENST00000356135 INHBEP58166 350 aa27.53■■■□□ 2
CHKA-202ENST00000356135 BRAPQ7Z569 592 aa27.53■■■□□ 2
CHKA-202ENST00000356135 FTOQ9C0B1 505 aaKnown RBP eCLIP27.53■■■□□ 29e-7■■■■■ 38.3
CHKA-202ENST00000356135 MYSM1Q5VVJ2 828 aa27.52■■■□□ 2
CHKA-202ENST00000356135 RABGAP1Q9Y3P9 1069 aa27.52■■■□□ 2
CHKA-202ENST00000356135 MYH15Q9Y2K3 1946 aa27.51■■□□□ 1.99
CHKA-202ENST00000356135 ATP2B1P20020 1258 aa27.51■■□□□ 1.99
CHKA-202ENST00000356135 SREBF2Q12772 1141 aa27.51■■□□□ 1.99
CHKA-202ENST00000356135 ANKRD13CQ8N6S4 541 aa27.51■■□□□ 1.99
CHKA-202ENST00000356135 PARK7Q99497 189 aaKnown RBP27.51■■□□□ 1.99
CHKA-202ENST00000356135 MOV10L1Q9BXT6 1211 aaKnown RBP27.51■■□□□ 1.99
CHKA-202ENST00000356135 TM4SF4P48230 202 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 TOB1P50616 345 aaPredicted RBP27.5■■□□□ 1.99
CHKA-202ENST00000356135 CEBPZQ03701 1054 aaKnown RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms