RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 HADHQ16836 314 aaKnown RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 STAM2O75886 525 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 KRT38O76015 456 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 SLFN12Q8IYM2 578 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 FNBP1Q96RU3 617 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RAPGEF1Q13905 1077 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 OR9Q1Q8NGQ5 310 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 NECTIN2Q92692 538 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 DCDC2Q9UHG0 476 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 CD109Q6YHK3 1445 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 ZPR1O75312 459 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 INHBAP08476 426 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 AK2P54819 239 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 FOXP3Q9BZS1 431 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 WDR46O15213 610 aaKnown RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 BRD1O95696 1058 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 CCND1P24385 295 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 ATP2B2Q01814 1243 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
HTT-201ENST00000355072 Q6ZUG5 572 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RAB44Q7Z6P3 723 aaPredicted RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 LCA5Q86VQ0 697 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
HTT-201ENST00000355072 ZNF710Q8N1W2 664 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 TMOD3Q9NYL9 352 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RBM8AQ9Y5S9 174 aaKnown RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 C16orf96A6NNT2 1141 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 H0Y626 953 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 TRIM16O95361 564 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 INAQ16352 499 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 RHPN1Q8TCX5 695 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 CEP19Q96LK0 163 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 FGD4Q96M96 766 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 TRPC6Q9Y210 931 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 PRDM15P57071 1507 aaPredicted RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 QRICH2Q9H0J4 1663 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 KRIT1O00522 736 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 KLC1Q07866 573 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 PRUNE1Q86TP1 453 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 SYBUQ9NX95 663 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RFX7Q2KHR2 1363 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 CDK12Q9NYV4 1490 aaPredicted RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 GOLGA8RI6L899 631 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 LONP1P36776 959 aaKnown RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 OTUB1Q96FW1 271 aaPredicted RBP8.73□□□□□ -1.01
HTT-201ENST00000355072 SIKE1Q9BRV8 207 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 GID8Q9NWU2 228 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 IQGAP3Q86VI3 1631 aa8.73□□□□□ -1.01
HTT-201ENST00000355072 RPS6KB1P23443 525 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 ZBTB40Q9NUA8 1239 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 PUF60Q9UHX1 559 aaKnown RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 PROM2Q8N271 834 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 NYXQ9GZU5 481 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 CDH2P19022 906 aaPredicted RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 S100A5P33763 92 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 KRT9P35527 623 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 DAB2IPQ5VWQ8 1189 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 JADE1Q6IE81 842 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 GUCY2CP25092 1073 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 RSBN1LQ6PCB5 846 aaPredicted RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 NFKBIAP25963 317 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 CENPUQ71F23 418 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 TTC39CQ8N584 583 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 KLF18A0A0U1RQI7 1052 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 ATP2C2O75185 946 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 TTKP33981 857 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 PURAQ00577 322 aaKnown RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 CYTH2Q99418 400 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 GGPS1O95749 300 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 CUL3Q13618 768 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 ANGPT1Q15389 498 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 MAPRE2Q15555 327 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 PTPDC1A2A3K4 754 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 MAP3K13O43283 966 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 RCSD1Q6JBY9 416 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 ECT2Q9H8V3 914 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 PCDHB13Q9Y5F0 798 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 USP19O94966 1318 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 RPAP1Q9BWH6 1393 aaPredicted RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 SNAPC5O75971 98 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 SCG2P13521 617 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 CREB3L3Q68CJ9 461 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 MBD2Q9UBB5 411 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 MCF2LO15068 1137 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 ATF2P15336 505 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 RBM5P52756 815 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■■■■ 26.9
HTT-201ENST00000355072 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 EPN1Q9Y6I3 576 aaPredicted RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
HTT-201ENST00000355072 CCDC22O60826 627 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 NAPAP54920 295 aa8.72□□□□□ -1.01
HTT-201ENST00000355072 MMEL1Q495T6 779 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms