RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 CTAGE8P0CG41 777 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 SF3A3Q12874 501 aaKnown RBP eCLIP10.76□□□□□ -0.69
RPE-201ENST00000354506 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 PAPD7Q5XG87 772 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 LEKR1Q6ZMV7 388 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 HDXQ7Z353 690 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 CTAGE6Q86UF2 777 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 CTAGE4Q8IX94 777 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 STAG2Q8N3U4 1231 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 DUSP9Q99956 384 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 CRNKL1Q9BZJ0 848 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 TMEM60Q9H2L4 133 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 ZNF652Q9Y2D9 606 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 RRP15Q9Y3B9 282 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 SBF2Q86WG5 1849 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 FLT1P17948 1338 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 ATP1A1P05023 1023 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 PRDX5P30044 214 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 TM4SF1P30408 202 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 PRPHP41219 470 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 HERVK_113P62684 666 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 SLC7A5Q01650 507 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 GRM4Q14833 912 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 EZH2Q15910 746 aaKnown RBP10.76□□□□□ -0.69
RPE-201ENST00000354506 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 KRT26Q7Z3Y9 468 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 OR8K1Q8NGG5 319 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 MMS19Q96T76 1030 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 MYO6Q9UM54 1294 aa10.76□□□□□ -0.69
RPE-201ENST00000354506 TUBBP07437 444 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 MYBL2P10244 700 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 COBLL1Q53SF7 1204 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
RPE-201ENST00000354506 LAD1O00515 517 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 SRGNP10124 158 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 KIF5BP33176 963 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 DDB1Q16531 1140 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 JADE2Q9NQC1 790 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 PALM3A6NDB9 673 aaPredicted RBP10.75□□□□□ -0.69
RPE-201ENST00000354506 STXBP3O00186 592 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 STAT6P42226 847 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 C2orf54Q08AI8 447 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 CCDC122Q5T0U0 273 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 ZSCAN29Q8IWY8 852 aaPredicted RBP10.75□□□□□ -0.69
RPE-201ENST00000354506 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
RPE-201ENST00000354506 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 HAUS4Q9H6D7 363 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 AGPAT5Q9NUQ2 364 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
RPE-201ENST00000354506 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
RPE-201ENST00000354506 HIBADHP31937 336 aaKnown RBP10.74□□□□□ -0.69
RPE-201ENST00000354506 KIAA1328Q86T90 577 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 RASSF4Q9H2L5 321 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 DDX60LQ5H9U9 1706 aaKnown RBP10.74□□□□□ -0.69
RPE-201ENST00000354506 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 B4DLN1 442 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 USP17L8P0C7I0 530 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 RPS8P62241 208 aaKnown RBP10.74□□□□□ -0.69
RPE-201ENST00000354506 CDK17Q00537 523 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 TFAP4Q01664 338 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 MIIPQ5JXC2 388 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 TBC1D9BQ66K14 1250 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 TXNRD3Q86VQ6 643 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 DHTKD1Q96HY7 919 aaPredicted RBP10.74□□□□□ -0.69
RPE-201ENST00000354506 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
RPE-201ENST00000354506 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
RPE-201ENST00000354506 TSPY2A6NKD2 308 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 DNM2P50570 870 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 ANKRD20A12PQ8NF67 263 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 NOC3LQ8WTT2 800 aaKnown RBP10.73□□□□□ -0.69
RPE-201ENST00000354506 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 C7orf25Q9BPX7 421 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 ZMYND12Q9H0C1 365 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 CUEDC2Q9H467 287 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 KANSL2Q9H9L4 492 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 ACTN2P35609 894 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 FIGNQ5HY92 759 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 MAGEF1Q9HAY2 307 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 LUC7L2Q9Y383 392 aaKnown RBP10.73□□□□□ -0.69
RPE-201ENST00000354506 A0A1W2PQJ5 194 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 RNF40O75150 1001 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 ERLIN1O75477 346 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 RPS6KA5O75582 802 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 GOLGA8HP0CJ92 632 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 NOVP48745 357 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 USP14P54578 494 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 DNAAF5Q86Y56 855 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 AK8Q96MA6 479 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 VIPAS39Q9H9C1 493 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 VAT1LQ9HCJ6 419 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
RPE-201ENST00000354506 KCNQ2O43526 872 aa10.72□□□□□ -0.69
RPE-201ENST00000354506 HNRNPH3P31942 346 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms