RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PSMA7O14818 248 aa24.48■■□□□ 1.51
SHMT1-202ENST00000352886 TRIM14Q14142 442 aa24.48■■□□□ 1.51
SHMT1-202ENST00000352886 SLC27A3Q5K4L6 730 aa24.48■■□□□ 1.51
SHMT1-202ENST00000352886 LRRC47Q8N1G4 583 aaKnown RBP24.48■■□□□ 1.51
SHMT1-202ENST00000352886 MAGEF1Q9HAY2 307 aa24.48■■□□□ 1.51
SHMT1-202ENST00000352886 PLIN4Q96Q06 1357 aa24.48■■□□□ 1.51
SHMT1-202ENST00000352886 TMEM260Q9NX78 707 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 ESYT2A0FGR8 921 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 KLRG2A4D1S0 409 aaPredicted RBP24.47■■□□□ 1.51
SHMT1-202ENST00000352886 EIF6P56537 245 aaKnown RBP24.47■■□□□ 1.51
SHMT1-202ENST00000352886 ERVK-24P63145 666 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 GABPAQ06546 454 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 TMTC1Q8IUR5 882 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 TRIM47Q96LD4 638 aa24.47■■□□□ 1.51
SHMT1-202ENST00000352886 AKR1B1P15121 316 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 CLCN6P51797 869 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 SEMA3FQ13275 785 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 POTEDQ86YR6 584 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 SP8Q8IXZ3 490 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 TRPC5Q9UL62 973 aaPredicted RBP24.46■■□□□ 1.51
SHMT1-202ENST00000352886 PPP2R3AQ06190 1150 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 TRIM9Q9C026 710 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 COA1Q9GZY4 146 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 THAP9Q9H5L6 903 aa24.46■■□□□ 1.51
SHMT1-202ENST00000352886 KRT9P35527 623 aa24.45■■□□□ 1.51
SHMT1-202ENST00000352886 DPP8Q6V1X1 898 aaPredicted RBP24.45■■□□□ 1.51
SHMT1-202ENST00000352886 CLEC10AQ8IUN9 316 aa24.45■■□□□ 1.51
SHMT1-202ENST00000352886 COA7Q96BR5 231 aa24.45■■□□□ 1.51
SHMT1-202ENST00000352886 DDX4Q9NQI0 724 aaKnown RBP24.45■■□□□ 1.51
SHMT1-202ENST00000352886 KIF5CO60282 957 aa24.45■■□□□ 1.5
SHMT1-202ENST00000352886 EEF1GP26641 437 aaKnown RBP24.45■■□□□ 1.5
SHMT1-202ENST00000352886 TTI2Q6NXR4 508 aa24.45■■□□□ 1.5
SHMT1-202ENST00000352886 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
SHMT1-202ENST00000352886 CERS5Q8N5B7 392 aa24.45■■□□□ 1.5
SHMT1-202ENST00000352886 ACRBPQ8NEB7 543 aa24.45■■□□□ 1.5
SHMT1-202ENST00000352886 hCG_1984214I3L0E3 225 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 PES1O00541 588 aaKnown RBP24.44■■□□□ 1.5
SHMT1-202ENST00000352886 PDE4DQ08499 809 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ASPRV1Q53RT3 343 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 CYP26C1Q6V0L0 522 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ZNF713Q8N859 430 aaPredicted RBP24.44■■□□□ 1.5
SHMT1-202ENST00000352886 MMTAG2Q9BU76 263 aaKnown RBP24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ANKRD31Q8N7Z5 1873 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 LGALS16A8MUM7 142 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 TXKP42681 527 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ASIC1P78348 528 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 KRT222Q8N1A0 295 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 MB21D1Q8N884 522 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 DHTKD1Q96HY7 919 aaPredicted RBP24.44■■□□□ 1.5
SHMT1-202ENST00000352886 EXOC1Q9NV70 894 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 TTF2Q9UNY4 1162 aaKnown RBP24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ATP6V0A2Q9Y487 856 aa24.44■■□□□ 1.5
SHMT1-202ENST00000352886 ORC2Q13416 577 aaPredicted RBP24.43■■□□□ 1.5
SHMT1-202ENST00000352886 CCDC47Q96A33 483 aaKnown RBP24.43■■□□□ 1.5
SHMT1-202ENST00000352886 GPCPD1Q9NPB8 672 aa24.43■■□□□ 1.5
SHMT1-202ENST00000352886 MAGEC2Q9UBF1 373 aaPredicted RBP24.43■■□□□ 1.5
SHMT1-202ENST00000352886 ADCY7P51828 1080 aa24.43■■□□□ 1.5
SHMT1-202ENST00000352886 C7orf25Q9BPX7 421 aa24.43■■□□□ 1.5
SHMT1-202ENST00000352886 ARGLU1Q9NWB6 273 aaPredicted RBP24.43■■□□□ 1.5
SHMT1-202ENST00000352886 SUGT1Q9Y2Z0 365 aa24.43■■□□□ 1.5
SHMT1-202ENST00000352886 IGKV6D-41A0A0C4DH26 115 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 SNHG28P0DPA3 235 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 CSGALNACT2Q8N6G5 542 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 CALML4Q96GE6 196 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 MXD3Q9BW11 206 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 ZC3H12CQ9C0D7 883 aaKnown RBP24.42■■□□□ 1.5
SHMT1-202ENST00000352886 FAM53CQ9NYF3 392 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 SERPINB13Q9UIV8 391 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 QSER1Q2KHR3 1735 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 TRIM37O94972 964 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 STK4Q13043 487 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 CALCRLQ16602 461 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 ZNF569Q5MCW4 686 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 ZNF507Q8TCN5 953 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 EEF2KMTQ96G04 330 aa24.42■■□□□ 1.5
SHMT1-202ENST00000352886 DUSP9Q99956 384 aaKnown RBP24.42■■□□□ 1.5
SHMT1-202ENST00000352886 ADAMTSL1Q8N6G6 1762 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 TTC26A0AVF1 554 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 AMPD3Q01432 767 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 MTMR9Q96QG7 549 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 EPC1Q9H2F5 836 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 A0A1W2PQC6 194 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 TTLL1O95922 423 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 FCER1AP12319 257 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 SCNN1DP51172 638 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 NOC3LQ8WTT2 800 aaKnown RBP24.41■■□□□ 1.5
SHMT1-202ENST00000352886 P2RX5Q93086 422 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 USP40Q9NVE5 1235 aa24.41■■□□□ 1.5
SHMT1-202ENST00000352886 SLC37A4O43826 429 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 CCNE1P24864 410 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 DMTNQ08495 405 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 TEX35Q5T0J7 233 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 BICDL2A1A5D9 508 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 TDP2O95551 362 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 DOK7Q18PE1 504 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 CHP1Q99653 195 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 SLF1Q9BQI6 1058 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 LRWD1Q9UFC0 647 aa24.4■■□□□ 1.5
SHMT1-202ENST00000352886 MYH4Q9Y623 1939 aa24.39■■□□□ 1.5
SHMT1-202ENST00000352886 B4DLN1 442 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms