RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 EDIL3O43854 480 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 FCER1AP12319 257 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 LONRF2Q1L5Z9 754 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 CHP1Q99653 195 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 UBXN6Q9BZV1 441 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 ZMYND12Q9H0C1 365 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 MYH1P12882 1939 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 RHOXF2BP0C7M4 288 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 ATP2B4P23634 1241 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 KLK7P49862 253 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 GPIHBP1Q8IV16 184 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 RBM17Q96I25 401 aaKnown RBP18.65■□□□□ 0.58
PDAP1-201ENST00000350498 RHOXF2Q9BQY4 288 aa18.65■□□□□ 0.58
PDAP1-201ENST00000350498 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 ERCC3P19447 782 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 GNAQP50148 359 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 KIF4BQ2VIQ3 1234 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 TTBK2Q6IQ55 1244 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 ADSSL1Q8N142 457 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
PDAP1-201ENST00000350498 POLRMTO00411 1230 aaKnown RBP18.64■□□□□ 0.57
PDAP1-201ENST00000350498 TXLNAP40222 546 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 UBXN1Q04323 297 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 MCM6Q14566 821 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 DPP8Q6V1X1 898 aaPredicted RBP18.64■□□□□ 0.57
PDAP1-201ENST00000350498 PROM2Q8N271 834 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 SLF1Q9BQI6 1058 aa18.64■□□□□ 0.57
PDAP1-201ENST00000350498 SLC16A2P36021 539 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 TXKP42681 527 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 CACNB3P54284 484 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 STK4Q13043 487 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 FILIP1LQ4L180 1135 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 C15orf52Q6ZUT6 534 aaKnown RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 ZFPM1Q8IX07 1006 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 MMTAG2Q9BU76 263 aaKnown RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 KIF5CO60282 957 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 PDHBP11177 359 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 SRGAP1Q7Z6B7 1085 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 CABP7Q86V35 215 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 DAGLBQ8NCG7 672 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 CCDC148Q8NFR7 591 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
PDAP1-201ENST00000350498 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
PDAP1-201ENST00000350498 SLC37A4O43826 429 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 TDP2O95551 362 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 ATP2B2Q01814 1243 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 RRP36Q96EU6 259 aaKnown RBP18.62■□□□□ 0.57
PDAP1-201ENST00000350498 SPZ1Q9BXG8 430 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 KBTBD4Q9NVX7 518 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 ADAMTSL1Q8N6G6 1762 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 LRRC10BA6NIK2 292 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 TPM1P09493 284 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 UBE2SQ16763 222 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 ABHD10Q9NUJ1 306 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
PDAP1-201ENST00000350498 CCDC66A2RUB6 948 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 OR52Z1P0C646 297 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 NONOQ15233 471 aaKnown RBP eCLIP18.61■□□□□ 0.57
PDAP1-201ENST00000350498 NCAPH2Q6IBW4 605 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 CTAGE1Q96RT6 745 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 CDC23Q9UJX2 597 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 PPP1R11O60927 126 aaPredicted RBP18.61■□□□□ 0.57
PDAP1-201ENST00000350498 KRT9P35527 623 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 NFIAQ12857 509 aa18.61■□□□□ 0.57
PDAP1-201ENST00000350498 NOA1Q8NC60 698 aaKnown RBP18.61■□□□□ 0.57
PDAP1-201ENST00000350498 GAKO14976 1311 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 TTC26A0AVF1 554 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 POTEMA6NI47 508 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 ENC1O14682 589 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 RAD21O60216 631 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 ARHGAP25P42331 645 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
PDAP1-201ENST00000350498 PDE11AQ9HCR9 933 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 MTMR4Q9NYA4 1195 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 SEC63Q9UGP8 760 aaKnown RBP18.6■□□□□ 0.57
PDAP1-201ENST00000350498 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
PDAP1-201ENST00000350498 B4DLN1 442 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 BBOX1O75936 387 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 CT47A1Q5JQC4 288 aaPredicted RBP18.6■□□□□ 0.57
PDAP1-201ENST00000350498 ANKRD40Q6AI12 368 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 NEK8Q86SG6 692 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
PDAP1-201ENST00000350498 CCSER1Q9C0I3 900 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 ABCB6Q9NP58 842 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 HDAC6Q9UBN7 1215 aa18.6■□□□□ 0.57
PDAP1-201ENST00000350498 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
PDAP1-201ENST00000350498 PDE4DQ08499 809 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 KCTD1Q719H9 257 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 TRIM9Q9C026 710 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 C6orf50Q9HD87 102 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms