RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FLOT1O75955 427 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 TECP42680 631 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 PPP2R3AQ06190 1150 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 BANK1Q8NDB2 785 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.25
SMAD9-201ENST00000350148 PLEKHA8P1O95397 391 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 PRR16Q569H4 304 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.25
SMAD9-201ENST00000350148 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
SMAD9-201ENST00000350148 ARHGAP6O43182 974 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 ALAS1P13196 640 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
SMAD9-201ENST00000350148 GAP43P17677 238 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
SMAD9-201ENST00000350148 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 PSMD2Q13200 908 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 AZI2Q9H6S1 392 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
SMAD9-201ENST00000350148 FLT1P17948 1338 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
SMAD9-201ENST00000350148 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
SMAD9-201ENST00000350148 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
SMAD9-201ENST00000350148 GPBP1Q86WP2 473 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 CHMP2AO43633 222 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 PHACTR2O75167 634 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 SPECC1LQ69YQ0 1117 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
SMAD9-201ENST00000350148 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
SMAD9-201ENST00000350148 STRN3Q13033 797 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 CCDC91Q7Z6B0 441 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 METTL14Q9HCE5 456 aaKnown RBP13.5□□□□□ -0.25
SMAD9-201ENST00000350148 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 GDF11O95390 407 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 IL1R1P14778 569 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 OSBPP22059 807 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 GPR162Q16538 588 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 CDC27P30260 824 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 NR5A1Q13285 461 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
SMAD9-201ENST00000350148 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMAD9-201ENST00000350148 ABCB11O95342 1321 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 DNM2P50570 870 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 FKBP1AP62942 108 aaKnown RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 CCNA1P78396 465 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 EXOC8Q8IYI6 725 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 CPSF2Q9P2I0 782 aaKnown RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 KIF4AO95239 1232 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 MORC3Q14149 939 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 HSP90AA4PQ58FG1 418 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 ADD3Q9UEY8 706 aaKnown RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 PCDHA5Q9Y5H7 936 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
SMAD9-201ENST00000350148 MSANTD4Q8NCY6 345 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 AGBL3Q8NEM8 1001 aa13.49□□□□□ -0.25
SMAD9-201ENST00000350148 N4BP1O75113 896 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 NOP2P46087 812 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 ZNF658Q5TYW1 1059 aaPredicted RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 GH2P01242 217 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 DMTNQ08495 405 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 TCHPQ9BT92 498 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 PANK4Q9NVE7 773 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 EEF1GP26641 437 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 ANTXR2P58335 489 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
SMAD9-201ENST00000350148 VPS16Q9H269 839 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms