RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 KCND1Q9NSA2 647 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 WDR35Q9P2L0 1181 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 PTGISQ16647 500 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 ANKRD20A2Q5SQ80 823 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 ANKRD20A1Q5TYW2 823 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
CTNNB1-201ENST00000349496 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 PFKFB2O60825 505 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 A1BGP04217 495 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 YY1P25490 414 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 RNF10Q8N5U6 811 aaKnown RBP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 DUSP9Q99956 384 aaKnown RBP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 CARD9Q9H257 536 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 NR1D1P20393 614 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 HSPA2P54652 639 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 FCHSD1Q86WN1 690 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 MYD88Q99836 296 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 AASDHPPTQ9NRN7 309 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 SNX14Q9Y5W7 946 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 ADCY9O60503 1353 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 A0A0G2JS52 829 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 USO1O60763 962 aaKnown RBP13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 BPIFB4P59827 614 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 CYFIP2Q96F07 1278 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 PXDNQ92626 1479 aa13.47□□□□□ -0.25
CTNNB1-201ENST00000349496 TCHHQ07283 1943 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 SRCAPQ6ZRS2 3230 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 MMEP08473 750 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 GBP1P32455 592 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 PDE1CQ14123 709 aaPredicted RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 CFAP157Q5JU67 520 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 NME8Q8N427 588 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 EAF2Q96CJ1 260 aaPredicted RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 CEP295NLQ96MC4 621 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 TUBA8Q9NY65 449 aaPredicted RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 GUCY2DQ02846 1103 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 DHX40Q8IX18 779 aaKnown RBP13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 BHMTQ93088 406 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 KAZALD1Q96I82 304 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.25
CTNNB1-201ENST00000349496 SLC26A4O43511 780 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 STK10O94804 968 aaKnown RBP13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 ITGA7Q13683 1181 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 RUFY3Q7L099 469 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 ARL8AQ96BM9 186 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.26
CTNNB1-201ENST00000349496 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 TMEM110-MUSTN1A8MSY1 372 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 DNM1LO00429 736 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 LIN7AO14910 233 aaPredicted RBP13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 KCNA2P16389 499 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 STIP1P31948 543 aaKnown RBP13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 GNAQP50148 359 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 APBA1Q02410 837 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 IQCEQ6IPM2 695 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 SLC3A2P08195 630 aaKnown RBP13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 GSTT1P30711 240 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 POSTNQ15063 836 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 EBF2Q9HAK2 575 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 TMCO1Q9UM00 188 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
CTNNB1-201ENST00000349496 FAM107AO95990 144 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 KRT14P02533 472 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms