RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ZNF622Q969S3 477 aaKnown RBP eCLIP20.79■□□□□ 0.92
SCARF1-202ENST00000348987 ATXN2Q99700 1313 aaKnown RBP20.78■□□□□ 0.92
SCARF1-202ENST00000348987 EHBP1Q8NDI1 1231 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 CHUKO15111 745 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 NMT2O60551 498 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 KRT14P02533 472 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 EPB41P11171 864 aaKnown RBP20.78■□□□□ 0.92
SCARF1-202ENST00000348987 KRT83P78385 493 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 SPAG1Q07617 926 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 TSR1Q2NL82 804 aaKnown RBP20.78■□□□□ 0.92
SCARF1-202ENST00000348987 RNF187Q5TA31 235 aaPredicted RBP20.78■□□□□ 0.92
SCARF1-202ENST00000348987 IQCEQ6IPM2 695 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 DNAJC7Q99615 494 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 BCL9LQ86UU0 1499 aa20.78■□□□□ 0.92
SCARF1-202ENST00000348987 VEGFAP15692 232 aaPredicted RBP20.77■□□□□ 0.92
SCARF1-202ENST00000348987 ATP2B2Q01814 1243 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 GUCY1A3Q02108 690 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 PAK1Q13153 545 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 NEDD9Q14511 834 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 CREG2Q8IUH2 290 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 NELFBQ8WX92 580 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
SCARF1-202ENST00000348987 RWDD2AQ9UIY3 292 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 GOLGB1Q14789 3259 aaKnown RBP20.77■□□□□ 0.92
SCARF1-202ENST00000348987 HSF2BPO75031 334 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 KLRK1P26718 216 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 PARP10Q53GL7 1025 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 NAA35Q5VZE5 725 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 RNF26Q9BY78 433 aaPredicted RBP20.77■□□□□ 0.92
SCARF1-202ENST00000348987 KLC4Q9NSK0 619 aa20.77■□□□□ 0.92
SCARF1-202ENST00000348987 TRIM75PA6NK02 468 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ADAMTS3O15072 1205 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 C21orf2O43822 256 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 NAP1L1P55209 391 aaKnown RBP20.76■□□□□ 0.91
SCARF1-202ENST00000348987 NNTQ13423 1086 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 MMGT1Q8N4V1 131 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 RNPC3Q96LT9 517 aaKnown RBP20.76■□□□□ 0.91
SCARF1-202ENST00000348987 CENPHQ9H3R5 247 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 PLCH1Q4KWH8 1693 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF804BA4D1E1 1349 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ELF1P32519 619 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 LSP1P33241 339 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 CYP27A1Q02318 531 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ZIM3Q96PE6 472 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 PHF20Q9BVI0 1012 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 MCM8Q9UJA3 840 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 BCORQ6W2J9 1755 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 AHDC1Q5TGY3 1603 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-202ENST00000348987 EP400Q96L91 3159 aa20.76■□□□□ 0.91
SCARF1-202ENST00000348987 ANO9A1A5B4 782 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 TROAPQ12815 778 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF174Q15697 407 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 NPY5RQ15761 445 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 IFIT1BQ5T764 474 aaKnown RBP20.75■□□□□ 0.91
SCARF1-202ENST00000348987 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SMCR8Q8TEV9 937 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-202ENST00000348987 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 XDHP47989 1333 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 EPHB4P54760 987 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 ALS2CLQ60I27 953 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SPATS2Q86XZ4 545 aaKnown RBP20.75■□□□□ 0.91
SCARF1-202ENST00000348987 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 N4BP2L2Q92802 583 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SMARCAL1Q9NZC9 954 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SPATA31A5Q5VU36 1347 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 SPATA31A7Q8IWB4 1347 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 TAF1P21675 1872 aa20.75■□□□□ 0.91
SCARF1-202ENST00000348987 A6NNZ2 444 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 ACTN3Q08043 901 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 TUBB8Q3ZCM7 444 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 SPATA4Q8NEY3 305 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 PSMB7Q99436 277 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 AGPAT5Q9NUQ2 364 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 CAPN11Q9UMQ6 739 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 MYH2Q9UKX2 1941 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 USP17L12C9JPN9 530 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 USP17L21D6R901 530 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 SEC24CP53992 1094 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 APBA1Q02410 837 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 CCDC40Q4G0X9 1142 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 MICALCLQ6ZW33 695 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 IRF2BP1Q8IU81 584 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF473Q8WTR7 871 aaKnown RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 TACO1Q9BSH4 297 aaKnown RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 EPN3Q9H201 632 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 COL22A1Q8NFW1 1626 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 CCDC189A1A4V9 331 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 TRIM49BA6NDI0 452 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 PARP1P09874 1014 aaKnown RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 SF3B2Q13435 895 aaKnown RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 PREPLQ4J6C6 727 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 CCDC13Q8IYE1 715 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 FAM84BQ96KN1 310 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 VCPKMTQ9H867 229 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 NHEJ1Q9H9Q4 299 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-202ENST00000348987 EHD2Q9NZN4 543 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms