RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 CLUL1Q15846 466 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 MIGA2Q7L4E1 593 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 HACE1Q8IYU2 909 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 TBCKQ8TEA7 893 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 GDAP1L1Q96MZ0 367 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 CDK12Q9NYV4 1490 aaPredicted RBP20.47■□□□□ 0.87
UBE3C-201ENST00000348165 A0A1W2PQ27 194 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 A0A1W2PQ64 194 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 A0A1W2PQD8 194 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 STK10O94804 968 aaKnown RBP20.47■□□□□ 0.87
UBE3C-201ENST00000348165 KCTD2Q14681 263 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 MMS19Q96T76 1030 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.47■□□□□ 0.87
UBE3C-201ENST00000348165 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
UBE3C-201ENST00000348165 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 SETDB1Q15047 1291 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 TBC1D10BQ4KMP7 808 aaPredicted RBP20.47■□□□□ 0.87
UBE3C-201ENST00000348165 USP17L1Q7RTZ2 530 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
UBE3C-201ENST00000348165 BMP3P12645 472 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 ALDH3A1P30838 453 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 GEN1Q17RS7 908 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 GOLGA5Q8TBA6 731 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 RSRC1Q96IZ7 334 aaKnown RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 AMFRQ9UKV5 643 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 DMP1Q13316 513 aaPredicted RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 NAA25Q14CX7 972 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 MAP7D1Q3KQU3 841 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 IQCDQ96DY2 449 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 PPANQ9NQ55 473 aaKnown RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 C1orf112Q9NSG2 853 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SAR1BQ9Y6B6 198 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 A0A087WWV3 80 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 KIF23Q02241 960 aaPredicted RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SLFNL1Q499Z3 407 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 AIFM3Q96NN9 605 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 ANKFY1Q9P2R3 1169 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 PNMA2Q9UL42 364 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 MCAMP43121 646 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SND1Q7KZF4 910 aaKnown RBP eCLIP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 SPATA24Q86W54 205 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 PI4K2BQ8TCG2 481 aa20.46■□□□□ 0.87
UBE3C-201ENST00000348165 LARP4BQ92615 738 aaKnown RBP20.46■□□□□ 0.87
UBE3C-201ENST00000348165 IFNB1P01574 187 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 CACNB1Q02641 598 aaPredicted RBP20.45■□□□□ 0.86
UBE3C-201ENST00000348165 NRBP2Q9NSY0 501 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 WDR70Q9NW82 654 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 BUB1O43683 1085 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 TRAPPC10P48553 1259 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 CASC4Q6P4E1 433 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 SMYD4Q8IYR2 804 aaPredicted RBP20.45■□□□□ 0.86
UBE3C-201ENST00000348165 TSKSQ9UJT2 592 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 LARGE1O95461 756 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 IFNAR1P17181 557 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 ATP5DP30049 168 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 ZNF577Q9BSK1 485 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 YWHAEP62258 255 aaKnown RBP20.45■□□□□ 0.86
UBE3C-201ENST00000348165 LONRF2Q1L5Z9 754 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 ANKRD13CQ8N6S4 541 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 RABEP2Q9H5N1 569 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
UBE3C-201ENST00000348165 PI4KBQ9UBF8 816 aa20.45■□□□□ 0.86
UBE3C-201ENST00000348165 CCDC93Q567U6 631 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 CLEC4GQ6UXB4 293 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 POMGNT1Q8WZA1 660 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 STIM2Q9P246 746 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 DPP9Q86TI2 863 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 ODF2LQ9ULJ1 636 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 TNNC2P02585 160 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 BSPRYQ5W0U4 402 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 GRAMD1CQ8IYS0 662 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 CLGNO14967 610 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 TMEM191BP0C7N4 346 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 PAK2Q13177 524 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 LRRC41Q15345 812 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 GSDMAQ96QA5 445 aa20.44■□□□□ 0.86
UBE3C-201ENST00000348165 DHX36Q9H2U1 1008 aaKnown RBP20.44■□□□□ 0.86
UBE3C-201ENST00000348165 SCYL2Q6P3W7 929 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 CEP128Q6ZU80 1094 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 AFAP1L1Q8TED9 768 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 KCNK3O14649 394 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 HGSO14964 777 aaPredicted RBP20.43■□□□□ 0.86
UBE3C-201ENST00000348165 PPP6R2O75170 966 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
UBE3C-201ENST00000348165 DDX41Q9UJV9 622 aaKnown RBP20.43■□□□□ 0.86
UBE3C-201ENST00000348165 HECW2Q9P2P5 1572 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
UBE3C-201ENST00000348165 NPR1P16066 1061 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 SESTD1Q86VW0 696 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 TMOD1P28289 359 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 CACNB3P54284 484 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 SMC1BQ8NDV3 1235 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms