RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 VWA3AA6NCI4 1184 aa24.41■■□□□ 1.5
TSPAN3-202ENST00000346495 PTPRAP18433 802 aa24.41■■□□□ 1.5
TSPAN3-202ENST00000346495 TEX2Q8IWB9 1127 aa24.41■■□□□ 1.5
TSPAN3-202ENST00000346495 GLTPD2A6NH11 291 aa24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 CCNT1O60563 726 aaKnown RBP24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 PRPHP41219 470 aa24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 USH1GQ495M9 461 aa24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 ZC3H15Q8WU90 426 aaKnown RBP24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 SCN4AP35499 1836 aa24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 PHIPQ8WWQ0 1821 aa24.4■■□□□ 1.5
TSPAN3-202ENST00000346495 EPHX2P34913 555 aa24.39■■□□□ 1.5
TSPAN3-202ENST00000346495 MTMR2Q13614 643 aa24.39■■□□□ 1.5
TSPAN3-202ENST00000346495 ELOA2Q8IYF1 753 aaPredicted RBP24.39■■□□□ 1.5
TSPAN3-202ENST00000346495 ZNF280CQ8ND82 737 aa24.39■■□□□ 1.5
TSPAN3-202ENST00000346495 LONP1P36776 959 aaKnown RBP24.39■■□□□ 1.49
TSPAN3-202ENST00000346495 SPP2Q13103 211 aa24.39■■□□□ 1.49
TSPAN3-202ENST00000346495 AP3B2Q13367 1082 aa24.39■■□□□ 1.49
TSPAN3-202ENST00000346495 DTHD1Q6ZMT9 781 aa24.39■■□□□ 1.49
TSPAN3-202ENST00000346495 NEMFO60524 1076 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 USP2O75604 605 aaPredicted RBP24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 BACE1P56817 501 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 IL17AQ16552 155 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 KRBA2Q6ZNG9 492 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 PRPF38AQ8NAV1 312 aaKnown RBP24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 RNF214Q8ND24 703 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 CNNM3Q8NE01 707 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 SYMPKQ92797 1274 aaKnown RBP24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 NAP1L4Q99733 375 aaKnown RBP24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 TMEM60Q9H2L4 133 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 EMILIN3Q9NT22 766 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 FBXO28Q9NVF7 368 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 FZD1Q9UP38 647 aa24.38■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L15C9J2P7 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L13C9JLJ4 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 ADM5C9JUS6 153 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L11C9JVI0 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L18D6R9N7 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L22D6RA61 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L17D6RBQ6 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L19D6RCP7 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L20D6RJB6 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 MEIS2O14770 477 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 POLR2DO15514 142 aaKnown RBP24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 OR52Z1P0C646 297 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L24Q0WX57 530 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 LONRF3Q496Y0 759 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 CCDC174Q6PII3 467 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP17L6PQ6QN14 398 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 USP49Q70CQ1 688 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 KRT26Q7Z3Y9 468 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 SLF1Q9BQI6 1058 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 HOOK1Q9UJC3 728 aaKnown RBP24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 MYH7BA7E2Y1 1941 aa24.37■■□□□ 1.49
TSPAN3-202ENST00000346495 C19orf81C9J6K1 198 aa24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 FOSP01100 380 aaPredicted RBP24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 EPSTI1Q96J88 318 aa24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 PYM1Q9BRP8 204 aaKnown RBP24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 KIAA1468Q9P260 1216 aa24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 ZHX2Q9Y6X8 837 aa24.36■■□□□ 1.49
TSPAN3-202ENST00000346495 IQCA1LA6NCM1 817 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 VCAM1P19320 739 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 UVSSAQ2YD98 709 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 PPP4R3AQ6IN85 833 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 KANK3Q6NY19 840 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 ANO3Q9BYT9 981 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 MRPL11Q9Y3B7 192 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 ABCB11O95342 1321 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 PPP1R12BO60237 982 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 CAVIN2O95810 425 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 GCFC2P16383 781 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 MAP3K9P80192 1104 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 STX1AQ16623 288 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 ANP32BQ92688 251 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 CCDC34Q96HJ3 373 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 C12orf42Q96LP6 360 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 PANK2Q9BZ23 570 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 TANGO6Q9C0B7 1094 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 USP25Q9UHP3 1055 aa24.35■■□□□ 1.49
TSPAN3-202ENST00000346495 PAPPA2Q9BXP8 1791 aa24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 PIK3CDO00329 1044 aa24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 TXLNAP40222 546 aa24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 PRKG1Q13976 671 aa24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 SAMD1Q6SPF0 538 aaPredicted RBP24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 RPAP3Q9H6T3 665 aaPredicted RBP24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 SERTAD1Q9UHV2 236 aa24.34■■□□□ 1.49
TSPAN3-202ENST00000346495 OPLAHO14841 1288 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 EDIL3O43854 480 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 NF2P35240 595 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 USP11P51784 963 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 ANO6Q4KMQ2 910 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 PDILTQ8N807 584 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 TAF1DQ9H5J8 278 aaPredicted RBP24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 ANO10Q9NW15 660 aa24.33■■□□□ 1.49
TSPAN3-202ENST00000346495 SPDYE3A6NKU9 549 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 TDP2O95551 362 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 ICAM1P05362 532 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 FDX1P10109 184 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 DGKZQ13574 1117 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 ZRSR1Q15695 479 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms