RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 DICER1Q9UPY3 1922 aaKnown RBP28.63■■■□□ 2.17
TRADD-201ENST00000345057 NT5DC1Q5TFE4 455 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 DCAF15Q66K64 600 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 ACER1Q8TDN7 264 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 SMARCE1Q969G3 411 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 SYT17Q9BSW7 474 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 TMEM260Q9NX78 707 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 CCDC39Q9UFE4 941 aa28.62■■■□□ 2.17
TRADD-201ENST00000345057 AP3B2Q13367 1082 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 IL17AQ16552 155 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 DPCR1Q3MIW9 517 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 FAM160B2Q86V87 743 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 DEFB129Q9H1M3 183 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 PCDHA5Q9Y5H7 936 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 PHF20L1A8MW92 1017 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 GCFC2P16383 781 aaKnown RBP28.61■■■□□ 2.17
TRADD-201ENST00000345057 TPM4P67936 248 aa28.61■■■□□ 2.17
TRADD-201ENST00000345057 SMTNL1A8MU46 457 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 CTNND1O60716 968 aaKnown RBP28.6■■■□□ 2.17
TRADD-201ENST00000345057 PPP4R3AQ6IN85 833 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 SPICE1Q8N0Z3 855 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 TMEM60Q9H2L4 133 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 GPRC5DQ9NZD1 345 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 DACH1Q9UI36 760 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 PRR12Q9ULL5 1215 aa28.6■■■□□ 2.17
TRADD-201ENST00000345057 BIN1O00499 593 aa28.59■■■□□ 2.17
TRADD-201ENST00000345057 UBA7P41226 1012 aa28.59■■■□□ 2.17
TRADD-201ENST00000345057 CCSER1Q9C0I3 900 aa28.59■■■□□ 2.17
TRADD-201ENST00000345057 PPP2R3BQ9Y5P8 575 aa28.59■■■□□ 2.17
TRADD-201ENST00000345057 FAM83BQ5T0W9 1011 aa28.58■■■□□ 2.17
TRADD-201ENST00000345057 SH3RF1Q7Z6J0 888 aa28.58■■■□□ 2.17
TRADD-201ENST00000345057 DHX40Q8IX18 779 aaKnown RBP28.58■■■□□ 2.17
TRADD-201ENST00000345057 FEM1BQ9UK73 627 aa28.58■■■□□ 2.17
TRADD-201ENST00000345057 A0A087X0B3 334 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 PTMAP06454 111 aaKnown RBP28.57■■■□□ 2.16
TRADD-201ENST00000345057 SARSP49591 514 aaKnown RBP28.57■■■□□ 2.16
TRADD-201ENST00000345057 UBE2SQ16763 222 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 SARM1Q6SZW1 724 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 SPATA20Q8TB22 786 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 RAB34Q9BZG1 259 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 FOSP01100 380 aaPredicted RBP28.57■■■□□ 2.16
TRADD-201ENST00000345057 E2F4Q16254 413 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 LPAR1Q92633 364 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 PAGE5Q96GU1 130 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 FEZ1Q99689 392 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 ZNF341Q9BYN7 854 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 ATAD5Q96QE3 1844 aa28.57■■■□□ 2.16
TRADD-201ENST00000345057 IKBKBO14920 756 aa28.56■■■□□ 2.16
TRADD-201ENST00000345057 CALCRLQ16602 461 aa28.56■■■□□ 2.16
TRADD-201ENST00000345057 TMEM266Q2M3C6 531 aa28.56■■■□□ 2.16
TRADD-201ENST00000345057 AOPEPQ8N6M6 819 aa28.56■■■□□ 2.16
TRADD-201ENST00000345057 USP11P51784 963 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 MLKLQ8NB16 471 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 RASSF8Q8NHQ8 419 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 CUEDC2Q9H467 287 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 DISC1Q9NRI5 854 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 FOXN1O15353 648 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 CT47A1Q5JQC4 288 aaPredicted RBP28.55■■■□□ 2.16
TRADD-201ENST00000345057 GSDMAQ96QA5 445 aa28.55■■■□□ 2.16
TRADD-201ENST00000345057 GOLGA6L6A8MZA4 724 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 STAT6P42226 847 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 ANGEL2Q5VTE6 544 aaKnown RBP28.54■■■□□ 2.16
TRADD-201ENST00000345057 MOXD1Q6UVY6 613 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.54■■■□□ 2.16
TRADD-201ENST00000345057 MTMR9Q96QG7 549 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 TRIM5Q9C035 493 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 KIAA1683Q9H0B3 1180 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 RANBP17Q9H2T7 1088 aaKnown RBP28.54■■■□□ 2.16
TRADD-201ENST00000345057 MAGEF1Q9HAY2 307 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 MAN1B1Q9UKM7 699 aa28.54■■■□□ 2.16
TRADD-201ENST00000345057 A0A087WWV3 80 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 MYL1P05976 194 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 KIAA1755Q5JYT7 1200 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 POTEDQ86YR6 584 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 ASTN2O75129 1339 aaPredicted RBP28.53■■■□□ 2.16
TRADD-201ENST00000345057 WDR46O15213 610 aaKnown RBP28.53■■■□□ 2.16
TRADD-201ENST00000345057 PRR29P0C7W0 189 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 FXR2P51116 673 aaKnown RBP eCLIP28.53■■■□□ 2.16
TRADD-201ENST00000345057 MORC3Q14149 939 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 USH1GQ495M9 461 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 RRAGBQ5VZM2 374 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 PDXDC2PQ6P474 469 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 FAM43AQ8N2R8 423 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 ANO3Q9BYT9 981 aa28.53■■■□□ 2.16
TRADD-201ENST00000345057 SPDYE3A6NKU9 549 aa28.52■■■□□ 2.16
TRADD-201ENST00000345057 AP5Z1O43299 807 aa28.52■■■□□ 2.16
TRADD-201ENST00000345057 DDX25Q9UHL0 483 aaKnown RBP28.52■■■□□ 2.16
TRADD-201ENST00000345057 USP17L15C9J2P7 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L13C9JLJ4 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L11C9JVI0 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L18D6R9N7 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L22D6RA61 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L17D6RBQ6 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L19D6RCP7 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L20D6RJB6 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 PIK3CDO00329 1044 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 MEIS2O14770 477 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 TPM3P06753 285 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 AFMP43652 599 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP14P54578 494 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms