RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SEC63Q9UGP8 760 aaKnown RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 CASP8AP2Q9UKL3 1982 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 GOLGA8AA7E2F4 631 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 ST18O60284 1047 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 PPP1R37O75864 691 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 FCER1AP12319 257 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 ERCC3P19447 782 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
SNCA-202ENST00000345009 KCTD2Q14681 263 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 CCDC174Q6PII3 467 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 ABRAQ8N0Z2 381 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 STAG2Q8N3U4 1231 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 SOCS4Q8WXH5 440 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 RRP36Q96EU6 259 aaKnown RBP13.73□□□□□ -0.21
SNCA-202ENST00000345009 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 NUDT12Q9BQG2 462 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
SNCA-202ENST00000345009 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 CPLX1O14810 134 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
SNCA-202ENST00000345009 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
SNCA-202ENST00000345009 POTEEQ6S8J3 1075 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 GPR142Q7Z601 462 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 RAET1EQ8TD07 263 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 PORCNQ9H237 461 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
SNCA-202ENST00000345009 SRRDQ9UH36 339 aa13.72□□□□□ -0.21
SNCA-202ENST00000345009 PNMA6FA0A0J9YX94 578 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 ZBTB5O15062 677 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 PEX10O60683 326 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 ALAS1P13196 640 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 RXRAP19793 462 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
SNCA-202ENST00000345009 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
SNCA-202ENST00000345009 TMTC3Q6ZXV5 915 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 FBXO11Q86XK2 927 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 DDX11Q96FC9 970 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 AGBL1Q96MI9 1066 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 MMP19Q99542 508 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 ARHGAP39Q9C0H5 1083 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 MAF1Q9H063 256 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
SNCA-202ENST00000345009 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
SNCA-202ENST00000345009 CDKL5O76039 1030 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 PTPREP23469 700 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 RGS2P41220 211 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 AK2P54819 239 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 SNAP25P60880 206 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
SNCA-202ENST00000345009 ANKRD35Q8N283 1001 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 HOMER2Q9NSB8 354 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 MRPL11Q9Y3B7 192 aaKnown RBP13.7□□□□□ -0.22
SNCA-202ENST00000345009 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
SNCA-202ENST00000345009 PFASO15067 1338 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 ZNF536O15090 1300 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 ABCB11O95342 1321 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 RLFQ13129 1914 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
SNCA-202ENST00000345009 MCM2P49736 904 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 FLT3LGP49771 235 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 IRF5Q13568 498 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 USH1GQ495M9 461 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
SNCA-202ENST00000345009 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
SNCA-202ENST00000345009 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
SNCA-202ENST00000345009 PIGSQ96S52 555 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
SNCA-202ENST00000345009 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
SNCA-202ENST00000345009 CYTH3O43739 400 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 ADORA2AP29274 412 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 CTGFP29279 349 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms