RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TPM1P09493 284 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 AKR1B1P15121 316 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 KRT9P35527 623 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 SOGA3Q5TF21 947 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
CCDC38-201ENST00000344280 TTI2Q6NXR4 508 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 RIOX1Q9H6W3 641 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 MTMR4Q9NYA4 1195 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 SLF2Q8IX21 1173 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 KRT222Q8N1A0 295 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 REXO1Q8N1G1 1221 aaKnown RBP24.05■■□□□ 1.44
CCDC38-201ENST00000344280 CERS5Q8N5B7 392 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 TRIM47Q96LD4 638 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 CHP1Q99653 195 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 PRDM4Q9UKN5 801 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 FHOD1Q9Y613 1164 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 AFF2P51816 1311 aa24.05■■□□□ 1.44
CCDC38-201ENST00000344280 EDIL3O43854 480 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 ONECUT3O60422 494 aaPredicted RBP24.04■■□□□ 1.44
CCDC38-201ENST00000344280 MYL1P05976 194 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 SLURP2P0DP57 97 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 FCER1AP12319 257 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 GABPAQ06546 454 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 STK4Q13043 487 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 AK8Q96MA6 479 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 DUSP9Q99956 384 aaKnown RBP24.04■■□□□ 1.44
CCDC38-201ENST00000344280 ST7Q9NRC1 585 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 TTC26A0AVF1 554 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 PES1O00541 588 aaKnown RBP24.04■■□□□ 1.44
CCDC38-201ENST00000344280 TMTC1Q8IUR5 882 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 MB21D1Q8N884 522 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 ZNF507Q8TCN5 953 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 HPS3Q969F9 1004 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 CRAMP1Q96RY5 1269 aa24.04■■□□□ 1.44
CCDC38-201ENST00000344280 PSMA7O14818 248 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 NKRFO15226 690 aaKnown RBP eCLIP24.03■■□□□ 1.44
CCDC38-201ENST00000344280 SMARCA1P28370 1054 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 ZNF569Q5MCW4 686 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 TEX35Q5T0J7 233 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 DPP8Q6V1X1 898 aaPredicted RBP24.03■■□□□ 1.44
CCDC38-201ENST00000344280 RSRC2Q7L4I2 434 aaKnown RBP24.03■■□□□ 1.44
CCDC38-201ENST00000344280 LGALS16A8MUM7 142 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 KIF5CO60282 957 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 TFRCP02786 760 aaKnown RBP24.03■■□□□ 1.44
CCDC38-201ENST00000344280 TXKP42681 527 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 PDE4DQ08499 809 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 SLF1Q9BQI6 1058 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 ZSWIM4Q9H7M6 989 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 GPCPD1Q9NPB8 672 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 LTBP1Q14766 1721 aa24.03■■□□□ 1.44
CCDC38-201ENST00000344280 PPEF1O14829 653 aaPredicted RBP24.02■■□□□ 1.44
CCDC38-201ENST00000344280 SLC37A4O43826 429 aa24.02■■□□□ 1.44
CCDC38-201ENST00000344280 CYP26C1Q6V0L0 522 aa24.02■■□□□ 1.44
CCDC38-201ENST00000344280 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
CCDC38-201ENST00000344280 SEC31AO94979 1220 aaKnown RBP24.01■■□□□ 1.43
CCDC38-201ENST00000344280 ARHGAP25P42331 645 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 ASIC1P78348 528 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 STIM1Q13586 685 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 THAP9Q9H5L6 903 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 FOCADQ5VW36 1801 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 ZRANB2O95218 330 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCDC38-201ENST00000344280 TDP2O95551 362 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 EEF1GP26641 437 aaKnown RBP24.01■■□□□ 1.43
CCDC38-201ENST00000344280 TRIM14Q14142 442 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 ANKRD40Q6AI12 368 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 CSGALNACT2Q8N6G5 542 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 CUEDC2Q9H467 287 aa24.01■■□□□ 1.43
CCDC38-201ENST00000344280 PLIN4Q96Q06 1357 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 ESYT2A0FGR8 921 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 B4DLN1 442 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 SCNN1DP51172 638 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 SLC35F6Q8N357 371 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 MTMR9Q96QG7 549 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 C7orf25Q9BPX7 421 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 IGKV6D-41A0A0C4DH26 115 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 PNMA6AP0CW24 399 aaPredicted RBP24■■□□□ 1.43
CCDC38-201ENST00000344280 EXOC1Q9NV70 894 aa24■■□□□ 1.43
CCDC38-201ENST00000344280 TTF2Q9UNY4 1162 aaKnown RBP24■■□□□ 1.43
CCDC38-201ENST00000344280 REXO2Q9Y3B8 237 aaKnown RBP24■■□□□ 1.43
CCDC38-201ENST00000344280 SNHG28P0DPA3 235 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 KLK7P49862 253 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 DOK7Q18PE1 504 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 TTBK2Q6IQ55 1244 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 SP8Q8IXZ3 490 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 KIAA0895Q8NCT3 520 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 DHTKD1Q96HY7 919 aaPredicted RBP23.99■■□□□ 1.43
CCDC38-201ENST00000344280 MAGEF1Q9HAY2 307 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 PPP1R11O60927 126 aaPredicted RBP23.99■■□□□ 1.43
CCDC38-201ENST00000344280 GRB10Q13322 594 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 P2RX5Q93086 422 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 BLOC1S4Q9NUP1 217 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 TRIM10Q9UDY6 481 aa23.99■■□□□ 1.43
CCDC38-201ENST00000344280 TRIM37O94972 964 aa23.98■■□□□ 1.43
CCDC38-201ENST00000344280 BMS1Q14692 1282 aaKnown RBP23.98■■□□□ 1.43
CCDC38-201ENST00000344280 CALCRLQ16602 461 aa23.98■■□□□ 1.43
CCDC38-201ENST00000344280 UTP14CQ5TAP6 766 aaKnown RBP23.98■■□□□ 1.43
CCDC38-201ENST00000344280 WDR59Q6PJI9 974 aa23.98■■□□□ 1.43
CCDC38-201ENST00000344280 TUBGCP2Q9BSJ2 902 aa23.98■■□□□ 1.43
CCDC38-201ENST00000344280 GTPBP4Q9BZE4 634 aaKnown RBP23.98■■□□□ 1.43
CCDC38-201ENST00000344280 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms