RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 CAMK4Q16566 473 aa25.09■■□□□ 1.61
CACNB1-201ENST00000344140 RBM43Q6ZSC3 357 aaKnown RBP25.09■■□□□ 1.61
CACNB1-201ENST00000344140 FAM13BQ9NYF5 915 aa25.09■■□□□ 1.61
CACNB1-201ENST00000344140 HPSEQ9Y251 543 aa25.09■■□□□ 1.61
CACNB1-201ENST00000344140 GPBP1L1Q9HC44 474 aaPredicted RBP25.09■■□□□ 1.61
CACNB1-201ENST00000344140 TMEM260Q9NX78 707 aa25.09■■□□□ 1.61
CACNB1-201ENST00000344140 LAD1O00515 517 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 NF2P35240 595 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 MAP3K9P80192 1104 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 TBCKQ8TEA7 893 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 TSPY26PQ9H489 355 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 FZD1Q9UP38 647 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 ZHX2Q9Y6X8 837 aa25.08■■□□□ 1.61
CACNB1-201ENST00000344140 C19orf81C9J6K1 198 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 ZNF202O95125 648 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 SYKP43405 635 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 MRE11P49959 708 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 PRPF38AQ8NAV1 312 aaKnown RBP25.07■■□□□ 1.6
CACNB1-201ENST00000344140 SLF1Q9BQI6 1058 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 EMILIN3Q9NT22 766 aa25.07■■□□□ 1.6
CACNB1-201ENST00000344140 USH1GQ495M9 461 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 C4orf32Q8N8J7 132 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 TIGD1Q96MW7 591 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 MRVI1Q9Y6F6 885 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 VCAM1P19320 739 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 UBE2SQ16763 222 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 LETM2Q2VYF4 491 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 C12orf42Q96LP6 360 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 CSRNP2Q9H175 543 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 FBXO28Q9NVF7 368 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 KCNH3Q9ULD8 1083 aa25.06■■□□□ 1.6
CACNB1-201ENST00000344140 YY1P25490 414 aa25.05■■□□□ 1.6
CACNB1-201ENST00000344140 IREB2P48200 963 aaKnown RBP25.05■■□□□ 1.6
CACNB1-201ENST00000344140 GRIN1Q05586 938 aa25.05■■□□□ 1.6
CACNB1-201ENST00000344140 AP3B2Q13367 1082 aa25.05■■□□□ 1.6
CACNB1-201ENST00000344140 PRKG1Q13976 671 aa25.05■■□□□ 1.6
CACNB1-201ENST00000344140 GRPEL1Q9HAV7 217 aa25.05■■□□□ 1.6
CACNB1-201ENST00000344140 CCNT1O60563 726 aaKnown RBP25.04■■□□□ 1.6
CACNB1-201ENST00000344140 CDCA5Q96FF9 252 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 SDF4Q9BRK5 362 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 TANGO6Q9C0B7 1094 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 CSADQ9Y600 493 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 POTEIP0CG38 1075 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 POTEJP0CG39 1038 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 CCDC192P0DO97 292 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 PRPHP41219 470 aa25.04■■□□□ 1.6
CACNB1-201ENST00000344140 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.04■■□□□ 1.6
CACNB1-201ENST00000344140 MEIS2O14770 477 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 FOSP01100 380 aaPredicted RBP25.03■■□□□ 1.6
CACNB1-201ENST00000344140 VGLL4Q14135 290 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 CCDC174Q6PII3 467 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 DLK2Q6UY11 383 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 LDHDQ86WU2 507 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 CKAP2LQ8IYA6 745 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 NAP1L4Q99733 375 aaKnown RBP25.03■■□□□ 1.6
CACNB1-201ENST00000344140 FUCA2Q9BTY2 467 aa25.03■■□□□ 1.6
CACNB1-201ENST00000344140 RPAP3Q9H6T3 665 aaPredicted RBP25.03■■□□□ 1.6
CACNB1-201ENST00000344140 MRPL11Q9Y3B7 192 aaKnown RBP25.03■■□□□ 1.6
CACNB1-201ENST00000344140 VWA3AA6NCI4 1184 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L15C9J2P7 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L13C9JLJ4 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L11C9JVI0 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L18D6R9N7 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L22D6RA61 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L17D6RBQ6 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L19D6RCP7 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L20D6RJB6 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 FDX1P10109 184 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L24Q0WX57 530 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 SPECC1Q5M775 1068 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 USP17L6PQ6QN14 398 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 RBM46Q8TBY0 533 aaKnown RBP25.02■■□□□ 1.6
CACNB1-201ENST00000344140 PNMA2Q9UL42 364 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 AFG3L2Q9Y4W6 797 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 SNCAIPQ9Y6H5 919 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 PIK3CDO00329 1044 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 NEMFO60524 1076 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 FLOT1O75955 427 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 LONP1P36776 959 aaKnown RBP25.02■■□□□ 1.6
CACNB1-201ENST00000344140 DTHD1Q6ZMT9 781 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 PPP1R9AQ9ULJ8 1098 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 ABCB11O95342 1321 aa25.02■■□□□ 1.6
CACNB1-201ENST00000344140 ICAM1P05362 532 aa25.01■■□□□ 1.59
CACNB1-201ENST00000344140 SAMD1Q6SPF0 538 aaPredicted RBP25.01■■□□□ 1.59
CACNB1-201ENST00000344140 TMOD4Q9NZQ9 345 aa25.01■■□□□ 1.59
CACNB1-201ENST00000344140 OR52Z1P0C646 297 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 GCFC2P16383 781 aaKnown RBP25■■□□□ 1.59
CACNB1-201ENST00000344140 HMGCS2P54868 508 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 DGKZQ13574 1117 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 PPP4R3AQ6IN85 833 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 ANO3Q9BYT9 981 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 TMEM60Q9H2L4 133 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 SASS6Q6UVJ0 657 aa25■■□□□ 1.59
CACNB1-201ENST00000344140 ELOA2Q8IYF1 753 aaPredicted RBP25■■□□□ 1.59
CACNB1-201ENST00000344140 SPDYE3A6NKU9 549 aa24.99■■□□□ 1.59
CACNB1-201ENST00000344140 OPLAHO14841 1288 aa24.99■■□□□ 1.59
CACNB1-201ENST00000344140 USP11P51784 963 aa24.99■■□□□ 1.59
CACNB1-201ENST00000344140 IL17AQ16552 155 aa24.99■■□□□ 1.59
CACNB1-201ENST00000344140 SH3D19Q5HYK7 790 aa24.99■■□□□ 1.59
CACNB1-201ENST00000344140 MAP1SQ66K74 1059 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms