RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 PCDHA4Q9UN74 947 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 STXBP3O00186 592 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 GH2P01242 217 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 SNW1Q13573 536 aaKnown RBP16.59■□□□□ 0.25
PBX3-201ENST00000342287 CAMK4Q16566 473 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 MICALL2Q8IY33 904 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 MED4Q9NPJ6 270 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 CNOT7Q9UIV1 285 aaKnown RBP16.59■□□□□ 0.25
PBX3-201ENST00000342287 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
PBX3-201ENST00000342287 CMA1P23946 247 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
PBX3-201ENST00000342287 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 PIGSQ96S52 555 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
PBX3-201ENST00000342287 PCDHB6Q9Y5E3 794 aa16.59■□□□□ 0.25
PBX3-201ENST00000342287 CLCN6P51797 869 aa16.58■□□□□ 0.25
PBX3-201ENST00000342287 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.25
PBX3-201ENST00000342287 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.25
PBX3-201ENST00000342287 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 hCG_1984214I3L0E3 225 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 MAP2K2P36507 400 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 CCDC96Q2M329 555 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 ZNF713Q8N859 430 aaPredicted RBP16.58■□□□□ 0.24
PBX3-201ENST00000342287 DAGLBQ8NCG7 672 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 DCAF4Q8WV16 495 aa16.58■□□□□ 0.24
PBX3-201ENST00000342287 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
PBX3-201ENST00000342287 CUTAO60888 179 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 JAG1P78504 1218 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 LRCH2Q5VUJ6 765 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 A0A1B0GVL5 298 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 LMNB1P20700 586 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 MAGEA9P43362 315 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 NAPAP54920 295 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 KRI1Q8N9T8 703 aaKnown RBP16.57■□□□□ 0.24
PBX3-201ENST00000342287 ANKRD20A12PQ8NF67 263 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 ZNF526Q8TF50 670 aaPredicted RBP16.57■□□□□ 0.24
PBX3-201ENST00000342287 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
PBX3-201ENST00000342287 CTAGE5O15320 804 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
PBX3-201ENST00000342287 BMP15O95972 392 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 EGFRP00533 1210 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 SLC1A4P43007 532 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 GSCP56915 257 aaPredicted RBP16.56■□□□□ 0.24
PBX3-201ENST00000342287 PPP2R5AQ15172 486 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 PIK3AP1Q6ZUJ8 805 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
PBX3-201ENST00000342287 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 RAD21O60216 631 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 NDUFA8P51970 172 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 RASA3Q14644 834 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
PBX3-201ENST00000342287 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 ZNF541Q9H0D2 1346 aa16.56■□□□□ 0.24
PBX3-201ENST00000342287 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 F5H6K3 240 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 M0R2N6 131 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 GNA11P29992 359 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 LMAN1P49257 510 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 KLRC3Q07444 240 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 H7C1D1 291 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 PTPREP23469 700 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
PBX3-201ENST00000342287 FUCA2Q9BTY2 467 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 SMCO2A6NFE2 343 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 H2AFXP16104 143 aaPredicted RBP16.55■□□□□ 0.24
PBX3-201ENST00000342287 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 CLIC6Q96NY7 704 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
PBX3-201ENST00000342287 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
PBX3-201ENST00000342287 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms