RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 PHTF2Q8N3S3 785 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 STAG1Q8WVM7 1258 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 MORF4L1Q9UBU8 362 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 SMAPO00193 183 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 LGR5O75473 907 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 CTGFP29279 349 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 NOVP48745 357 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 NT5C2P49902 561 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 HERVK_113P62684 666 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 TCEAL1Q15170 157 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 FBXO46Q6PJ61 603 aaPredicted RBP12.11□□□□□ -0.47
TPM3-207ENST00000341372 MKL1Q969V6 931 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 TRIM17Q9Y577 477 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 HTTP42858 3142 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
TPM3-207ENST00000341372 TSPY3P0CV98 308 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 TSPY8P0CW00 308 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 PTPROQ16827 1216 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 TBC1D10CQ8IV04 446 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 CEP95Q96GE4 821 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 P2RX7Q99572 595 aaKnown RBP12.1□□□□□ -0.47
TPM3-207ENST00000341372 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 RPAP3Q9H6T3 665 aaPredicted RBP12.1□□□□□ -0.47
TPM3-207ENST00000341372 ZSWIM4Q9H7M6 989 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 EFCC1Q9HA90 598 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
TPM3-207ENST00000341372 TFAP4Q01664 338 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 KIF22Q14807 665 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
TPM3-207ENST00000341372 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
TPM3-207ENST00000341372 TTLL1O95922 423 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 PRMT2P55345 433 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 HAND2P61296 217 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 RNF41Q9H4P4 317 aaPredicted RBP12.09□□□□□ -0.47
TPM3-207ENST00000341372 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
TPM3-207ENST00000341372 ZNF213O14771 459 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
TPM3-207ENST00000341372 FCGRTP55899 365 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 KCNB2Q92953 911 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 RBPJLQ9UBG7 517 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 TSPY2A6NKD2 308 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 CNMDO75829 334 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 PSMC4P43686 418 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
TPM3-207ENST00000341372 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 RABGAP1Q9Y3P9 1069 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 NEDD4P46934 1319 aa12.08□□□□□ -0.48
TPM3-207ENST00000341372 COL11A1P12107 1806 aaPredicted RBP12.07□□□□□ -0.48
TPM3-207ENST00000341372 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 NDUFB10O96000 172 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 PTH1RQ03431 593 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 SRRDQ9UH36 339 aa12.07□□□□□ -0.48
TPM3-207ENST00000341372 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
TPM3-207ENST00000341372 F5H6K3 240 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
TPM3-207ENST00000341372 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 ERVK-24P63145 666 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 IGBP1P78318 339 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 KLRC3Q07444 240 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 COG2Q14746 738 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 JAZF1Q86VZ6 243 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 NKX2-3Q8TAU0 364 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 RNF34Q969K3 372 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 FKBPLQ9UIM3 349 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 ZNF236Q9UL36 1845 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms