RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SIGLEC14Q08ET2 396 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 PTPRNQ16849 979 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 CTC1Q2NKJ3 1217 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 HERC6Q8IVU3 1022 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 ZNF775Q96BV0 537 aaPredicted RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 SLC9A7Q96T83 725 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 AS3MTQ9HBK9 375 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 MTUS1Q9ULD2 1270 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 SYNRGQ9UMZ2 1314 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
ATXN3-201ENST00000340660 TAL1P17542 331 aaPredicted RBP14.13□□□□□ -0.15
ATXN3-201ENST00000340660 CAP2P40123 477 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
ATXN3-201ENST00000340660 COL19A1Q14993 1142 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 VPS37DQ86XT2 251 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
ATXN3-201ENST00000340660 SCLYQ96I15 445 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 GLT1D1Q96MS3 346 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 SLC24A3Q9HC58 644 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 ZZEF1O43149 2961 aa14.13□□□□□ -0.15
ATXN3-201ENST00000340660 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
ATXN3-201ENST00000340660 AXIN1O15169 862 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 GCKRQ14397 625 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 DUSP27Q5VZP5 1158 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 PHOSPHO2Q8TCD6 241 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 PABPC5Q96DU9 382 aaKnown RBP14.12□□□□□ -0.15
ATXN3-201ENST00000340660 CHAMP1Q96JM3 812 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 NOC4LQ9BVI4 516 aaKnown RBP14.12□□□□□ -0.15
ATXN3-201ENST00000340660 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
ATXN3-201ENST00000340660 SPTLC1O15269 473 aa14.11□□□□□ -0.15
ATXN3-201ENST00000340660 DESI1Q6ICB0 168 aa14.11□□□□□ -0.15
ATXN3-201ENST00000340660 LDHAL6AQ6ZMR3 332 aa14.11□□□□□ -0.15
ATXN3-201ENST00000340660 EP400NLQ6ZTU2 488 aa14.11□□□□□ -0.15
ATXN3-201ENST00000340660 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
ATXN3-201ENST00000340660 SOBPA7XYQ1 873 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 JAG1P78504 1218 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
ATXN3-201ENST00000340660 CNNM1Q9NRU3 951 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 EVA1BQ9NVM1 165 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 NRBP1Q9UHY1 535 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 NAV2Q8IVL1 2488 aa14.1□□□□□ -0.15
ATXN3-201ENST00000340660 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 STXBP3O00186 592 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 MBTPS2O43462 519 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
ATXN3-201ENST00000340660 LTBRP36941 435 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 CLUL1Q15846 466 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 VTI1AQ96AJ9 217 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 AGBL1Q96MI9 1066 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
ATXN3-201ENST00000340660 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
ATXN3-201ENST00000340660 ASGR1P07306 291 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 AKR1A1P14550 325 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 PRDX5P30044 214 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 RIPK4P57078 832 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 ERVK-21P61565 698 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 FOXO4P98177 505 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 PICALMQ13492 652 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 SHROOM1Q2M3G4 852 aaPredicted RBP14.08□□□□□ -0.16
ATXN3-201ENST00000340660 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 TMEM105Q8N8V8 129 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 CHMP3Q9Y3E7 222 aa14.08□□□□□ -0.16
ATXN3-201ENST00000340660 CYSRT1A8MQ03 144 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 STRNO43815 780 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 PFKMP08237 780 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 SH3BP2P78314 561 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 DEFB128Q7Z7B8 93 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
ATXN3-201ENST00000340660 TNKSO95271 1327 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 FRYQ5TBA9 3013 aa14.07□□□□□ -0.16
ATXN3-201ENST00000340660 CFAP99D6REC4 459 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 SIAH2O43255 324 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 CST5P28325 142 aaPredicted RBP14.06□□□□□ -0.16
ATXN3-201ENST00000340660 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 TCEAL5Q5H9L2 206 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 TMCO2Q7Z6W1 182 aaPredicted RBP14.06□□□□□ -0.16
ATXN3-201ENST00000340660 HPS1Q92902 700 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 MOV10L1Q9BXT6 1211 aaKnown RBP14.06□□□□□ -0.16
ATXN3-201ENST00000340660 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
ATXN3-201ENST00000340660 ADRB1P08588 477 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 COL9A3Q14050 684 aaPredicted RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 CAVIN4Q5BKX8 364 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 MRPL38Q96DV4 380 aaKnown RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 GMPR2Q9P2T1 348 aaKnown RBP14.05□□□□□ -0.16
ATXN3-201ENST00000340660 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 PTPRSQ13332 1948 aa14.05□□□□□ -0.16
ATXN3-201ENST00000340660 OTOGLQ3ZCN5 2332 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms