RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 PCDHA8Q9Y5H6 950 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 A0A0G2JMZ2 1700 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 SLC10A3P09131 477 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 TMEM132BQ14DG7 1078 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 PEX10O60683 326 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 MYSM1Q5VVJ2 828 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 CUL5Q93034 780 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 PTPN18Q99952 460 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 BIN2Q9UBW5 565 aaPredicted RBP15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 ZNF214Q9UL59 606 aaPredicted RBP15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 ABCB11O95342 1321 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 TCHHQ07283 1943 aa15.3■□□□□ 0.04
GTF2F2-201ENST00000340473 FAM155AB1AL88 458 aaPredicted RBP15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 OSBPP22059 807 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 HERVK_113P62684 666 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 TRAF1Q13077 416 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 PABPC4Q13310 644 aaKnown RBP eCLIP15.29■□□□□ 0.043e-11■■■□□ 17
GTF2F2-201ENST00000340473 UBE2SQ16763 222 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 PDHXO00330 501 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 DEKP35659 375 aaKnown RBP15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 OAZ1P54368 228 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 PIK3AP1Q6ZUJ8 805 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 GBP4Q96PP9 640 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
GTF2F2-201ENST00000340473 MEIS2O14770 477 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 CYP2C8P10632 490 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 ALAS1P13196 640 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 MRPL12P52815 198 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 JAKMIP3Q5VZ66 844 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 SNRNP48Q6IEG0 339 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 HHIPL1Q96JK4 782 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 HOMER2Q9NSB8 354 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 TFIP11Q9UBB9 837 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 TESPA1A2RU30 521 aaPredicted RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 TOB1P50616 345 aaPredicted RBP15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 TBC1D5Q92609 795 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 GDPD2Q9HCC8 539 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
GTF2F2-201ENST00000340473 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 CNMDO75829 334 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 KRT85P78386 507 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 PLS1Q14651 629 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 CCDC102AQ96A19 550 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 PGBD1Q96JS3 809 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 TXNRD2Q9NNW7 524 aa15.27■□□□□ 0.04
GTF2F2-201ENST00000340473 MANSC4A6NHS7 340 aaPredicted RBP15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 NFIBO00712 420 aa15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 STAT3P40763 770 aa15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 CEBPZQ03701 1054 aaKnown RBP15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 PNMA3Q9UL41 463 aa15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 PNMA2Q9UL42 364 aa15.27■□□□□ 0.03
GTF2F2-201ENST00000340473 WNT7AO00755 349 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 FIBPO43427 364 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 APLP1P51693 650 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 KRT25Q7Z3Z0 450 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 PAGR1Q9BTK6 254 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 RBPJLQ9UBG7 517 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 CLIC4Q9Y696 253 aa15.26■□□□□ 0.03
GTF2F2-201ENST00000340473 PIK3CDO00329 1044 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 IGF2BP3O00425 579 aaKnown RBP eCLIP15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 CFBP00751 764 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 ATP2B1P20020 1258 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 GRM1Q13255 1194 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 INF2Q27J81 1249 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 RILPL1Q5EBL4 403 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 CYP4F22Q6NT55 531 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 ZIC5Q96T25 663 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 MCM4P33991 863 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 NONOQ15233 471 aaKnown RBP eCLIP15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 NFKBIBQ15653 356 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 ATL3Q6DD88 541 aa15.25■□□□□ 0.03
GTF2F2-201ENST00000340473 SPATC1LQ9H0A9 340 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms