RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MCM3APO60318 1980 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 MCCP23508 829 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 TNFAIP2Q03169 654 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
LINC01116-202ENST00000339037 FAM126BQ8IXS8 530 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 STAG1Q8WVM7 1258 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 CHMP4CQ96CF2 233 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 AGBL1Q96MI9 1066 aa18.54■□□□□ 0.56
LINC01116-202ENST00000339037 ZNF536O15090 1300 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 TLR3O15455 904 aaKnown RBP18.53■□□□□ 0.56
LINC01116-202ENST00000339037 GRIN2CQ14957 1233 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 ZMYM1Q5SVZ6 1142 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 TMEM199Q8N511 208 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
LINC01116-202ENST00000339037 TIFAQ96CG3 184 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 TRERF1Q96PN7 1200 aa18.53■□□□□ 0.56
LINC01116-202ENST00000339037 ASB14A6NK59 587 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 TSPY2A6NKD2 308 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 CTAGE5O15320 804 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 ALAS1P13196 640 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 CSF2RAP15509 400 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 NKX3-2P78367 333 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 BEX3Q00994 111 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 KCTD1Q719H9 257 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 C16orf59Q7L2K0 433 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 TLK2Q86UE8 772 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 PPP1R12CQ9BZL4 782 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 ZNF576Q9H609 170 aa18.52■□□□□ 0.56
LINC01116-202ENST00000339037 XIRP2A4UGR9 3374 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.51■□□□□ 0.55
LINC01116-202ENST00000339037 SOWAHBA6NEL2 793 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 PLA2G6O60733 806 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 MX1P20591 662 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 TMEM240Q5SV17 173 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 PSRC1Q6PGN9 363 aaPredicted RBP18.51■□□□□ 0.55
LINC01116-202ENST00000339037 CXCL17Q6UXB2 119 aa18.51■□□□□ 0.55
LINC01116-202ENST00000339037 GNEQ9Y223 722 aaKnown RBP18.51■□□□□ 0.55
LINC01116-202ENST00000339037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC01116-202ENST00000339037 ASTN1O14525 1302 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 FOXP2O15409 715 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 NMT2O60551 498 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 CABYRO75952 493 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 FSCN1Q16658 493 aaKnown RBP18.5■□□□□ 0.55
LINC01116-202ENST00000339037 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 RCSD1Q6JBY9 416 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 AP5M1Q9H0R1 490 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 PRR12Q9ULL5 1215 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
LINC01116-202ENST00000339037 CD4P01730 458 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 ACRP10323 421 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 SNAP25P60880 206 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 CTDSPL2Q05D32 466 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 ZNF365Q70YC5 407 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 RASGRP2Q7LDG7 609 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 PBX4Q9BYU1 374 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 IL17RBQ9NRM6 502 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
LINC01116-202ENST00000339037 FARP1Q9Y4F1 1045 aaPredicted RBP18.49■□□□□ 0.55
LINC01116-202ENST00000339037 DDX49Q9Y6V7 483 aaKnown RBP18.49■□□□□ 0.55
LINC01116-202ENST00000339037 TRANK1O15050 2925 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 GRXCR1A8MXD5 290 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 ZEB2O60315 1214 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 RANBP6O60518 1105 aaKnown RBP18.48■□□□□ 0.55
LINC01116-202ENST00000339037 SMPD1P17405 629 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 CYP2C18P33260 490 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 PBX2P40425 430 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 NSMFQ6X4W1 530 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 FBXO16Q8IX29 292 aaPredicted RBP18.48■□□□□ 0.55
LINC01116-202ENST00000339037 SLC43A3Q8NBI5 491 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
LINC01116-202ENST00000339037 HIPK3Q9H422 1215 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 MTMR7Q9Y216 660 aa18.48■□□□□ 0.55
LINC01116-202ENST00000339037 REV3LO60673 3130 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 RIOK3O14730 519 aaKnown RBP18.47■□□□□ 0.55
LINC01116-202ENST00000339037 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
LINC01116-202ENST00000339037 PTGS1P23219 599 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 RRP1P56182 461 aaKnown RBP18.47■□□□□ 0.55
LINC01116-202ENST00000339037 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 CCDC96Q2M329 555 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 EEPD1Q7L9B9 569 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 USP38Q8NB14 1042 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 GAS2L1Q99501 681 aaPredicted RBP18.47■□□□□ 0.55
LINC01116-202ENST00000339037 MTIF3Q9H2K0 278 aaKnown RBP18.47■□□□□ 0.55
LINC01116-202ENST00000339037 IL23AQ9NPF7 189 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 PDGFCQ9NRA1 345 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
LINC01116-202ENST00000339037 BDP1A6H8Y1 2624 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 ICAM1P05362 532 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 CHRM1P11229 460 aaPredicted RBP18.46■□□□□ 0.55
LINC01116-202ENST00000339037 FXR2P51116 673 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC01116-202ENST00000339037 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 IQSEC1Q6DN90 963 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 TAPT1Q6NXT6 567 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 DCAF4Q8WV16 495 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms