RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CNOT11Q9UKZ1 510 aaKnown RBP4.78□□□□□ -1.64
XRCC4-202ENST00000338635 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 PMF1-BGLAPU3KQ54 211 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 F8W031 263 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-202ENST00000338635 TNFRSF10CO14798 259 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 FBLN1P23142 703 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 PRR5P85299 388 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 CWF19L1Q69YN2 538 aaKnown RBP4.78□□□□□ -1.64
XRCC4-202ENST00000338635 BICRALQ6AI39 1079 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 C7orf61Q8IZ16 206 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 ZNF526Q8TF50 670 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-202ENST00000338635 SLC9A7Q96T83 725 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 PDLIM7Q9NR12 457 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 UBP1Q9NZI7 540 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 FAN1Q9Y2M0 1017 aa4.78□□□□□ -1.64
XRCC4-202ENST00000338635 SRGAP3O43295 1099 aa4.77□□□□□ -1.65
XRCC4-202ENST00000338635 ZNF165P49910 485 aa4.77□□□□□ -1.65
XRCC4-202ENST00000338635 ZNF827Q17R98 1081 aa4.77□□□□□ -1.65
XRCC4-202ENST00000338635 SAPCD2Q86UD0 394 aa4.77□□□□□ -1.65
XRCC4-202ENST00000338635 DDX1Q92499 740 aaKnown RBP4.77□□□□□ -1.65
XRCC4-202ENST00000338635 SH3D21A4FU49 640 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 NCAM1P13591 858 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 ITGAEP38570 1179 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 NOP2P46087 812 aaKnown RBP4.76□□□□□ -1.65
XRCC4-202ENST00000338635 HTRA3P83110 453 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 CCDC144CPQ8IYA2 1237 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 SLC16A11Q8NCK7 471 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 DHRS1Q96LJ7 313 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 MENTQ9BUN1 341 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 SUCOQ9UBS9 1254 aaKnown RBP4.76□□□□□ -1.65
XRCC4-202ENST00000338635 ADAMTS1Q9UHI8 967 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 DBR1Q9UK59 544 aaKnown RBP4.76□□□□□ -1.65
XRCC4-202ENST00000338635 DUSP10Q9Y6W6 482 aa4.76□□□□□ -1.65
XRCC4-202ENST00000338635 FAM86C2PA6NEL3 165 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 MEIS3P2A8K0S8 358 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 C9IYK1 514 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 FGF10O15520 208 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-202ENST00000338635 MAGEA10P43363 369 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-202ENST00000338635 APOBRQ0VD83 1088 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 USP48Q86UV5 1035 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 RNF38Q9H0F5 515 aa4.75□□□□□ -1.65
XRCC4-202ENST00000338635 H0Y8X5 98 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 SHOXO15266 292 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 NOBOXO60393 691 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 ASGR2P07307 311 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 TACR1P25103 407 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 CNR2P34972 360 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 MC3RP41968 323 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 NOL9Q5SY16 702 aaKnown RBP4.74□□□□□ -1.65
XRCC4-202ENST00000338635 INTS3Q68E01 1043 aaKnown RBP4.74□□□□□ -1.65
XRCC4-202ENST00000338635 CYP2R1Q6VVX0 501 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 CARFQ8N187 725 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 BRF1Q92994 677 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 NKD1Q969G9 470 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 SRRTQ9BXP5 876 aaKnown RBP4.74□□□□□ -1.65
XRCC4-202ENST00000338635 GGT7Q9UJ14 662 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 ZNF445P59923 1031 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 DLX2Q07687 328 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-202ENST00000338635 ANKRD39Q53RE8 183 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 SLITRK4Q8IW52 837 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 RGS22Q8NE09 1264 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 NLGN2Q8NFZ4 835 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 ALG3Q92685 438 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 FCRL3Q96P31 734 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-202ENST00000338635 SORCS2Q96PQ0 1159 aa4.74□□□□□ -1.65
XRCC4-202ENST00000338635 TBC1D8O95759 1140 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 FSHBP01225 129 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 ITGB3P05106 788 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 ACRP10323 421 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 TNFRSF1AP19438 455 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 HMGA2P52926 109 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 PMS1P54277 932 aaKnown RBP4.73□□□□□ -1.65
XRCC4-202ENST00000338635 CORO7P57737 925 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 ADAM17P78536 824 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 TDRD10Q5VZ19 366 aaKnown RBP4.73□□□□□ -1.65
XRCC4-202ENST00000338635 DCAF15Q66K64 600 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 B3GNT8Q7Z7M8 397 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 PTCHD1Q96NR3 888 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 NT5C1AQ9BXI3 368 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 LNPKQ9C0E8 428 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 GP6Q9HCN6 339 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 SMPD4Q9NXE4 827 aa4.73□□□□□ -1.65
XRCC4-202ENST00000338635 L1CAMP32004 1257 aa4.72□□□□□ -1.65
XRCC4-202ENST00000338635 SARSP49591 514 aaKnown RBP4.72□□□□□ -1.65
XRCC4-202ENST00000338635 GJA9P57773 515 aa4.72□□□□□ -1.65
XRCC4-202ENST00000338635 HS2ST1Q7LGA3 356 aa4.72□□□□□ -1.65
XRCC4-202ENST00000338635 BCAS3Q9H6U6 928 aa4.72□□□□□ -1.65
XRCC4-202ENST00000338635 RXFP1Q9HBX9 757 aa4.72□□□□□ -1.65
XRCC4-202ENST00000338635 TP53P04637 393 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-202ENST00000338635 GLI4P10075 376 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 PMLP29590 882 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 AXDND1Q5T1B0 1012 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-202ENST00000338635 PPFIBP1Q86W92 1011 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 FIBCD1Q8N539 461 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 NOX5Q96PH1 765 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 RBM15Q96T37 977 aaKnown RBP eCLIP4.71□□□□□ -1.66
XRCC4-202ENST00000338635 SF3B6Q9Y3B4 125 aaKnown RBP4.71□□□□□ -1.66
XRCC4-202ENST00000338635 FHOD1Q9Y613 1164 aa4.71□□□□□ -1.66
XRCC4-202ENST00000338635 CD3EP07766 207 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms