RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PHF20L1A8MW92 1017 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 LMNB1P20700 586 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 STAT2P52630 851 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 FBXO11Q86XK2 927 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 PDILTQ8N807 584 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 MLKLQ8NB16 471 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 DHX58Q96C10 678 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 PAGE5Q96GU1 130 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 TMEM60Q9H2L4 133 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
HPS1-202ENST00000338546 SHTN1A0MZ66 631 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 GOLGA6L6A8MZA4 724 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 ESPNB1AK53 854 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 AP5Z1O43299 807 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 FOSP01100 380 aaPredicted RBP18.41■□□□□ 0.54
HPS1-202ENST00000338546 MYL1P05976 194 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 ZSCAN30Q86W11 494 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 PLA2G4DQ86XP0 818 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
HPS1-202ENST00000338546 GPC2Q8N158 579 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 GSDMAQ96QA5 445 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 CUEDC2Q9H467 287 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 MAGEF1Q9HAY2 307 aa18.41■□□□□ 0.54
HPS1-202ENST00000338546 A0A087X0B3 334 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 CTNND1O60716 968 aaKnown RBP18.4■□□□□ 0.54
HPS1-202ENST00000338546 CDC25BP30305 580 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 UBA7P41226 1012 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 ECE1P42892 770 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 USP11P51784 963 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 MORC3Q14149 939 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 MOXD1Q6UVY6 613 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 MTMR9Q96QG7 549 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 TMEM260Q9NX78 707 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 MAN1B1Q9UKM7 699 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
HPS1-202ENST00000338546 BIN1O00499 593 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 PTMAP06454 111 aaKnown RBP18.39■□□□□ 0.53
HPS1-202ENST00000338546 FXR2P51116 673 aaKnown RBP eCLIP18.39■□□□□ 0.53
HPS1-202ENST00000338546 ZNF75DP51815 510 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 PLCB2Q00722 1185 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.53
HPS1-202ENST00000338546 PDIA5Q14554 519 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 PDXDC2PQ6P474 469 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 CDAN1Q8IWY9 1227 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 MRFAP1L1Q96HT8 127 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 NUP88Q99567 741 aaPredicted RBP18.39■□□□□ 0.53
HPS1-202ENST00000338546 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 DISC1Q9NRI5 854 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 FEM1BQ9UK73 627 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.53
HPS1-202ENST00000338546 FOXN1O15353 648 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 GTPBP6O43824 516 aaPredicted RBP18.38■□□□□ 0.53
HPS1-202ENST00000338546 DPYDQ12882 1025 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 LPAR1Q92633 364 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 TRIM5Q9C035 493 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 DEFB129Q9H1M3 183 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 ZNF541Q9H0D2 1346 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 PIK3CDO00329 1044 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 SLC26A4O43511 780 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 EGFRP00533 1210 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 CYP3A7P24462 503 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 CALCRLQ16602 461 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
HPS1-202ENST00000338546 RANBP17Q9H2T7 1088 aaKnown RBP18.38■□□□□ 0.53
HPS1-202ENST00000338546 GPRC5DQ9NZD1 345 aa18.38■□□□□ 0.53
HPS1-202ENST00000338546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.37■□□□□ 0.53
HPS1-202ENST00000338546 EDIL3O43854 480 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
HPS1-202ENST00000338546 STAT6P42226 847 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 MYL5Q02045 173 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 NCAPHQ15003 741 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 MBOAT7Q96N66 472 aa18.37■□□□□ 0.53
HPS1-202ENST00000338546 ATAD5Q96QE3 1844 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 A0A087WWV3 80 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 MEIS2O14770 477 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 UBE2SQ16763 222 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 FAM83BQ5T0W9 1011 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 SPICE1Q8N0Z3 855 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 RMND1Q9NWS8 449 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 ZNF112Q9UJU3 913 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 PNMA2Q9UL42 364 aa18.36■□□□□ 0.53
HPS1-202ENST00000338546 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
HPS1-202ENST00000338546 BMP6P22004 513 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 KIAA1755Q5JYT7 1200 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms