RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 POLR2MP0CAP2 368 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SOX5P35711 763 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 ASPHQ12797 758 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 CHURC1Q8WUH1 139 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 GCP02774 474 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SLC39A2Q9NP94 309 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 RNF8O76064 485 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 EEF1B2P24534 225 aaKnown RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 ANO4Q32M45 955 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 USP21Q9UK80 565 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 PDE6BP35913 854 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 PI4K2BQ8TCG2 481 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 CAPN7Q9Y6W3 813 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 KIAA0586Q9BVV6 1533 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 MAP3K21Q5TCX8 1036 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 TNRQ92752 1358 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 TUBBP07437 444 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 MESDQ14696 234 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
SHANK2-201ENST00000338508 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 WDR48Q8TAF3 677 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 SLC13A4Q9UKG4 626 aa12.86□□□□□ -0.35
SHANK2-201ENST00000338508 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 CCDC138Q96M89 665 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 IL16Q14005 1332 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 INHBAP08476 426 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 MAFGO15525 162 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 METTL23Q86XA0 190 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 OTUD7AQ8TE49 926 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 N4BP2L2Q92802 583 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 AP5M1Q9H0R1 490 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 KCNJ18B7U540 433 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 EPHB1P54762 984 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 IRX4P78413 519 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 KCNJ12Q14500 433 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 GRK7Q8WTQ7 553 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 CFAP36Q96G28 342 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 GOLGA8SH3BPF8 625 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 ARHGAP6O43182 974 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 SART1O43290 800 aaKnown RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 RPSAP08865 295 aaKnown RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 OCM2P0CE71 109 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-201ENST00000338508 PTPREP23469 700 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 MARK3P27448 753 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 INTUQ9ULD6 942 aa12.85□□□□□ -0.35
SHANK2-201ENST00000338508 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 IFNAR2P48551 515 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 GNGT1P63211 74 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 MLKLQ8NB16 471 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 MORC3Q14149 939 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 WHAMMP3Q1A5X7 153 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 LRRC8CQ8TDW0 803 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 MMTAG2Q9BU76 263 aaKnown RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 KRT40Q6A162 431 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 GJA10Q969M2 543 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 EYA1Q99502 592 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 PIP4K2CQ8TBX8 421 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 WDR91A4D1P6 747 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF75DP51815 510 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 LPIN2Q92539 896 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-201ENST00000338508 SAR1BQ9Y6B6 198 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 USP17L21D6R901 530 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 GYG1P46976 350 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms