RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TRAF1Q13077 416 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
CBX3-201ENST00000337620 TBCKQ8TEA7 893 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 PHIPQ8WWQ0 1821 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 A0A1W2PQ27 194 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 A0A1W2PQ64 194 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 A0A1W2PQD8 194 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 BMP15O95972 392 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
CBX3-201ENST00000337620 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 MRPS27Q92552 414 aaKnown RBP16.76■□□□□ 0.27
CBX3-201ENST00000337620 C12orf42Q96LP6 360 aa16.76■□□□□ 0.27
CBX3-201ENST00000337620 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 CUTAO60888 179 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 CLK2P49760 499 aaKnown RBP16.75■□□□□ 0.27
CBX3-201ENST00000337620 PTGDRQ13258 359 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 LETM2Q2VYF4 491 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
CBX3-201ENST00000337620 MAP3K11Q16584 847 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
CBX3-201ENST00000337620 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
CBX3-201ENST00000337620 CTDP1Q9Y5B0 961 aaPredicted RBP16.75■□□□□ 0.27
CBX3-201ENST00000337620 OTOFQ9HC10 1997 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 SYCE3A1L190 88 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 CCNT1O60563 726 aaKnown RBP16.74■□□□□ 0.27
CBX3-201ENST00000337620 PTPREP23469 700 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 CMA1P23946 247 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
CBX3-201ENST00000337620 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
CBX3-201ENST00000337620 MEIS2O14770 477 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 GRIN1Q05586 938 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 PPATQ06203 517 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 IRF6O14896 467 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 ZBED4O75132 1171 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 NDUFA8P51970 172 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 ATP2C1P98194 919 aaPredicted RBP16.73■□□□□ 0.27
CBX3-201ENST00000337620 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 CAMK4Q16566 473 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 SH3D19Q5HYK7 790 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 SHC4Q6S5L8 630 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
CBX3-201ENST00000337620 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
CBX3-201ENST00000337620 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
CBX3-201ENST00000337620 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 OPLAHO14841 1288 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 ICAM1P05362 532 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
CBX3-201ENST00000337620 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
CBX3-201ENST00000337620 ATG4CQ96DT6 458 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 RAVER2Q9HCJ3 691 aaKnown RBP16.72■□□□□ 0.27
CBX3-201ENST00000337620 ZNF536O15090 1300 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 CFBP00751 764 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 PFKFB1P16118 471 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 COG2Q14746 738 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 CATSPERGQ6ZRH7 1159 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
CBX3-201ENST00000337620 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
CBX3-201ENST00000337620 ABCB11O95342 1321 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 VWA5AO00534 786 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 KINO60870 393 aaKnown RBP16.71■□□□□ 0.27
CBX3-201ENST00000337620 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
CBX3-201ENST00000337620 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 DSG3P32926 999 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 LDLRAD1Q5T700 205 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 FMR1NBQ8N0W7 255 aaPredicted RBP16.7■□□□□ 0.26
CBX3-201ENST00000337620 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 LETM1O95202 739 aaPredicted RBP16.7■□□□□ 0.26
CBX3-201ENST00000337620 FDX1P10109 184 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 ALAS1P13196 640 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 ZNF445P59923 1031 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 MCTP2Q6DN12 878 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms