RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 TANC1Q9C0D5 1861 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 TNFAIP2Q03169 654 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 GABPAQ06546 454 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 TCTN1Q2MV58 587 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 CTC1Q2NKJ3 1217 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 TLK2Q86UE8 772 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
TSPO-202ENST00000337554 ZBED2Q9BTP6 218 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 ACACBO00763 2458 aa18.89■□□□□ 0.61
TSPO-202ENST00000337554 SUPT20HL2P0C7V6 817 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 KCNJ6P48051 423 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 TFCP2Q12800 502 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 CLUL1Q15846 466 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 CCDC144CPQ8IYA2 1237 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 FBXO22Q8NEZ5 403 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 DDX11Q96FC9 970 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 VCPKMTQ9H867 229 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 CLDND1Q9NY35 253 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 TMX2Q9Y320 296 aa18.88■□□□□ 0.61
TSPO-202ENST00000337554 STXBP3O00186 592 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 PITPNM1O00562 1244 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 WDR46O15213 610 aaKnown RBP18.87■□□□□ 0.61
TSPO-202ENST00000337554 GALR2O43603 387 aaPredicted RBP18.87■□□□□ 0.61
TSPO-202ENST00000337554 COPB2P35606 906 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 TIGD5Q53EQ6 642 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 DGLUCYQ7Z3D6 616 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
TSPO-202ENST00000337554 SMPD1P17405 629 aa18.86■□□□□ 0.61
TSPO-202ENST00000337554 SIGLEC14Q08ET2 396 aa18.86■□□□□ 0.61
TSPO-202ENST00000337554 RPAINQ86UA6 219 aa18.86■□□□□ 0.61
TSPO-202ENST00000337554 CTNNA3Q9UI47 895 aa18.86■□□□□ 0.61
TSPO-202ENST00000337554 DYNC1LI2O43237 492 aaPredicted RBP18.85■□□□□ 0.61
TSPO-202ENST00000337554 NUBP1P53384 320 aa18.85■□□□□ 0.61
TSPO-202ENST00000337554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■■■■□ 26
TSPO-202ENST00000337554 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
TSPO-202ENST00000337554 NEUROD6Q96NK8 337 aa18.85■□□□□ 0.61
TSPO-202ENST00000337554 ATRXP46100 2492 aa18.85■□□□□ 0.61
TSPO-202ENST00000337554 LOC730098B7Z3J9 87 aa18.84■□□□□ 0.61
TSPO-202ENST00000337554 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
TSPO-202ENST00000337554 PTPROQ16827 1216 aa18.84■□□□□ 0.61
TSPO-202ENST00000337554 NOL8Q76FK4 1167 aaKnown RBP18.84■□□□□ 0.61
TSPO-202ENST00000337554 FRMD5Q7Z6J6 570 aa18.84■□□□□ 0.61
TSPO-202ENST00000337554 NKD2Q969F2 451 aaPredicted RBP18.84■□□□□ 0.61
TSPO-202ENST00000337554 NSUN3Q9H649 340 aaKnown RBP18.84■□□□□ 0.61
TSPO-202ENST00000337554 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
TSPO-202ENST00000337554 AKAP2Q9Y2D5 859 aa18.84■□□□□ 0.61
TSPO-202ENST00000337554 ZEB2O60315 1214 aa18.83■□□□□ 0.6
TSPO-202ENST00000337554 PDGFBP01127 241 aaPredicted RBP18.83■□□□□ 0.6
TSPO-202ENST00000337554 SMAD4Q13485 552 aaKnown RBP18.83■□□□□ 0.6
TSPO-202ENST00000337554 COL9A2Q14055 689 aaPredicted RBP18.83■□□□□ 0.6
TSPO-202ENST00000337554 EPC2Q52LR7 807 aa18.83■□□□□ 0.6
TSPO-202ENST00000337554 PPP1R13LQ8WUF5 828 aa18.83■□□□□ 0.6
TSPO-202ENST00000337554 MYO5AQ9Y4I1 1855 aaKnown RBP18.83■□□□□ 0.6
TSPO-202ENST00000337554 KDM4AO75164 1064 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 CYP2E1P05181 493 aaPredicted RBP18.82■□□□□ 0.6
TSPO-202ENST00000337554 USP5P45974 858 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 CBX2Q14781 532 aaPredicted RBP18.82■□□□□ 0.6
TSPO-202ENST00000337554 SNRNP48Q6IEG0 339 aaKnown RBP18.82■□□□□ 0.6
TSPO-202ENST00000337554 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 COL26A1Q96A83 441 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 TEX13BQ9BXU2 312 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 AP5M1Q9H0R1 490 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 PDGFCQ9NRA1 345 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
TSPO-202ENST00000337554 MYO7AQ13402 2215 aa18.82■□□□□ 0.6
TSPO-202ENST00000337554 H3BNC9 293 aa18.81■□□□□ 0.6
TSPO-202ENST00000337554 TBX10O75333 385 aa18.81■□□□□ 0.6
TSPO-202ENST00000337554 TMEM179Q6ZVK1 233 aa18.81■□□□□ 0.6
TSPO-202ENST00000337554 MIGA1Q8NAN2 632 aa18.81■□□□□ 0.6
TSPO-202ENST00000337554 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
TSPO-202ENST00000337554 CNTN2Q02246 1040 aa18.8■□□□□ 0.6
TSPO-202ENST00000337554 HYAL1Q12794 435 aa18.8■□□□□ 0.6
TSPO-202ENST00000337554 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
TSPO-202ENST00000337554 SP7Q8TDD2 431 aaPredicted RBP18.8■□□□□ 0.6
TSPO-202ENST00000337554 Q9Y3F1 56 aa18.8■□□□□ 0.6
TSPO-202ENST00000337554 ATG2AQ2TAZ0 1938 aa18.8■□□□□ 0.6
TSPO-202ENST00000337554 TAPT1Q6NXT6 567 aa18.79■□□□□ 0.6
TSPO-202ENST00000337554 MRPL50Q8N5N7 158 aaKnown RBP18.79■□□□□ 0.6
TSPO-202ENST00000337554 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
TSPO-202ENST00000337554 PIH1D3Q9NQM4 214 aaKnown RBP18.79■□□□□ 0.6
TSPO-202ENST00000337554 EP300Q09472 2414 aaPredicted RBP18.79■□□□□ 0.6
TSPO-202ENST00000337554 NBNO60934 754 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 CXCL10P02778 98 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 CYP7A1P22680 504 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■■■□ 26
TSPO-202ENST00000337554 ICA1Q05084 483 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 GPM6BQ13491 265 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 NBPF20Q3BBV1 942 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 GORABQ5T7V8 394 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 CNKSR3Q6P9H4 555 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 ARHGEF10LQ9HCE6 1279 aa18.78■□□□□ 0.6
TSPO-202ENST00000337554 RALYQ9UKM9 306 aaKnown RBP18.78■□□□□ 0.6
TSPO-202ENST00000337554 ATP2A1O14983 1001 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 NCK2O43639 380 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 AKR1B1P15121 316 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms