RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 IFIH1Q9BYX4 1025 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 EHD2Q9NZN4 543 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ESYT3A0FGR9 886 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 TLDC2A0PJX2 215 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 GNAQP50148 359 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 PRR16Q569H4 304 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 TMTC1Q8IUR5 882 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 NSUN4Q96CB9 384 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 GSDMAQ96QA5 445 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 NYXQ9GZU5 481 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 USP40Q9NVE5 1235 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 MYO6Q9UM54 1294 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 CAMTA2O94983 1202 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ABCB4P21439 1286 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 PABPC4Q13310 644 aaKnown RBP eCLIP9.17□□□□□ -0.94
HPS4-201ENST00000336873 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ANKRD2Q9GZV1 360 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 SAR1BQ9Y6B6 198 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 PIK3C2AO00443 1686 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 SALL1Q9NSC2 1324 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ERVV-1B6SEH8 477 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 NCK2O43639 380 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 TRIM37O94972 964 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 TDP2O95551 362 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 HOXA13P31271 388 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 POLR2FP61218 127 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 TROAPQ12815 778 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 RNF187Q5TA31 235 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 POTEDQ86YR6 584 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 CWC15Q9P013 229 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 KIAA1024Q9UPX6 916 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 CLIC2O15247 247 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 CTIFO43310 598 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 MFAP3LO75121 409 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 MOCS3O95396 460 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PLEKP08567 350 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 HNRNPH2P55795 449 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 STK4Q13043 487 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 NOA1Q8NC60 698 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 LINC00116Q8NCU8 138 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.16□□□□□ -0.94
HPS4-201ENST00000336873 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 TUBE1Q9UJT0 475 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PDE4DIPQ5VU43 2346 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 TCRBV5S4A2TA0A5A2 114 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 TACC1O75410 805 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 FTCDO95954 541 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 OR52Z1P0C646 297 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 GJC1P36383 396 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 TCP11X2Q5H9J9 407 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 NEK8Q86SG6 692 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 BSDC1Q9NW68 430 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 ARPP21Q9UBL0 812 aaPredicted RBP9.16□□□□□ -0.94
HPS4-201ENST00000336873 CDC23Q9UJX2 597 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 FAM205AQ6ZU69 1335 aa9.16□□□□□ -0.94
HPS4-201ENST00000336873 NDUFA10O95299 355 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 HLA-DOAP06340 250 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 CDK8P49336 464 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 PMS1P54277 932 aaKnown RBP9.15□□□□□ -0.94
HPS4-201ENST00000336873 DPYDQ12882 1025 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 ZSCAN26Q16670 478 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 REXO1L1PQ8IX06 675 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 GPR161Q8N6U8 529 aaKnown RBP9.15□□□□□ -0.94
HPS4-201ENST00000336873 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 HYOU1Q9Y4L1 999 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 DCCP43146 1447 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 CLRN2A0PK11 232 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 GYPCP04921 128 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 KRT83P78385 493 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 APBA1Q02410 837 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 EHHADHQ08426 723 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 ARHGAP44Q17R89 818 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 GPATCH11Q8N954 259 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
HPS4-201ENST00000336873 PCDHA4Q9UN74 947 aa9.15□□□□□ -0.94
HPS4-201ENST00000336873 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
HPS4-201ENST00000336873 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 SPDYE3A6NKU9 549 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 NTSR2O95665 410 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 STAT3P40763 770 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 PRKG1Q13976 671 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 HDXQ7Z353 690 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms