RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TMEM60Q9H2L4 133 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 PCDHA6Q9UN73 950 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 PCDHA8Q9Y5H6 950 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 ZC3H4Q9UPT8 1303 aaKnown RBP22.28■■□□□ 1.16
CDCA4-201ENST00000336219 PDE2AO00408 941 aaPredicted RBP22.28■■□□□ 1.16
CDCA4-201ENST00000336219 KCNB1Q14721 858 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 HAUS4Q9H6D7 363 aa22.28■■□□□ 1.16
CDCA4-201ENST00000336219 CNTNAP4Q9C0A0 1308 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 IRS2Q9Y4H2 1338 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 B4DLN1 442 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 GNAQP50148 359 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 SPTY2D1Q68D10 685 aaPredicted RBP22.27■■□□□ 1.16
CDCA4-201ENST00000336219 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 KIAA1328Q86T90 577 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 DAGLBQ8NCG7 672 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 AFAP1L1Q8TED9 768 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 EIF3CLB5ME19 914 aaKnown RBP22.27■■□□□ 1.16
CDCA4-201ENST00000336219 KLRC4O43908 158 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 ZNF507Q8TCN5 953 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 JAKMIP2Q96AA8 810 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 EIF3CQ99613 913 aaKnown RBP22.27■■□□□ 1.16
CDCA4-201ENST00000336219 DNAJC7Q99615 494 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 ACBD3Q9H3P7 528 aa22.27■■□□□ 1.16
CDCA4-201ENST00000336219 ROBO3Q96MS0 1386 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 LGALS16A8MUM7 142 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 GGCXP38435 758 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 MRPS25P82663 173 aaKnown RBP22.26■■□□□ 1.15
CDCA4-201ENST00000336219 C2orf54Q08AI8 447 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 NBPF5PQ86XG9 351 aaPredicted RBP22.26■■□□□ 1.15
CDCA4-201ENST00000336219 RASSF8Q8NHQ8 419 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 SETDB2Q96T68 719 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 CCSER1Q9C0I3 900 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 NKRFO15226 690 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDCA4-201ENST00000336219 CYTH3O43739 400 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 MYL1P05976 194 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 CYP27A1Q02318 531 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 INF2Q27J81 1249 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 GPIHBP1Q8IV16 184 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 KBTBD4Q9NVX7 518 aa22.26■■□□□ 1.15
CDCA4-201ENST00000336219 MACROD2A1Z1Q3 448 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 USP17L3A6NCW0 530 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 USP17L4A6NCW7 530 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 EEF1GP26641 437 aaKnown RBP22.25■■□□□ 1.15
CDCA4-201ENST00000336219 UBA7P41226 1012 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 AARSP49588 968 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDCA4-201ENST00000336219 PAPD7Q5XG87 772 aaKnown RBP22.25■■□□□ 1.15
CDCA4-201ENST00000336219 GALNT17Q6IS24 598 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 USP17L1Q7RTZ2 530 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 TRIM47Q96LD4 638 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 CAPN11Q9UMQ6 739 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 SBF2Q86WG5 1849 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 A0A1W2PQC6 194 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 RASSF10A6NK89 507 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 RHOBTB3O94955 611 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 TUBBP07437 444 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 STIM1Q13586 685 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 CAGE1Q8TC20 777 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 THAP9Q9H5L6 903 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 MKNK2Q9HBH9 465 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 BARHL2Q9NY43 387 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 SRP68Q9UHB9 627 aaKnown RBP22.25■■□□□ 1.15
CDCA4-201ENST00000336219 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
CDCA4-201ENST00000336219 STXBP3O00186 592 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 HEATR3Q7Z4Q2 680 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 GIMAP8Q8ND71 665 aaPredicted RBP22.24■■□□□ 1.15
CDCA4-201ENST00000336219 SH3RF3Q8TEJ3 882 aaPredicted RBP22.24■■□□□ 1.15
CDCA4-201ENST00000336219 SMCR8Q8TEV9 937 aaPredicted RBP22.24■■□□□ 1.15
CDCA4-201ENST00000336219 LRRC15Q8TF66 581 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 COG1Q8WTW3 980 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 LAD1O00515 517 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 NOP2P46087 812 aaKnown RBP22.24■■□□□ 1.15
CDCA4-201ENST00000336219 SEMA3FQ13275 785 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 CCDC178Q5BJE1 867 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 PACS2Q86VP3 889 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 GOLGA6L1Q8N7Z2 621 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 VIPAS39Q9H9C1 493 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 TCP11L1Q9NUJ3 509 aa22.24■■□□□ 1.15
CDCA4-201ENST00000336219 AGPSO00116 658 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 PSMA7O14818 248 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 TSPY3P0CV98 308 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 TSPY8P0CW00 308 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 EZH2Q15910 746 aaKnown RBP22.23■■□□□ 1.15
CDCA4-201ENST00000336219 TSR1Q2NL82 804 aaKnown RBP22.23■■□□□ 1.15
CDCA4-201ENST00000336219 SELENOOQ9BVL4 669 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 RABEP2Q9H5N1 569 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 LDHBP07195 334 aaKnown RBP22.23■■□□□ 1.15
CDCA4-201ENST00000336219 TM4SF1P30408 202 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 PRPHP41219 470 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 TTI2Q6NXR4 508 aa22.23■■□□□ 1.15
CDCA4-201ENST00000336219 NHEJ1Q9H9Q4 299 aaPredicted RBP22.23■■□□□ 1.15
CDCA4-201ENST00000336219 PALM3A6NDB9 673 aaPredicted RBP22.22■■□□□ 1.15
CDCA4-201ENST00000336219 JADE2Q9NQC1 790 aa22.22■■□□□ 1.15
CDCA4-201ENST00000336219 TRIM21P19474 475 aaKnown RBP22.22■■□□□ 1.15
CDCA4-201ENST00000336219 IDEP14735 1019 aa22.21■■□□□ 1.15
CDCA4-201ENST00000336219 MAP9Q49MG5 647 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms