RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 STAT2P52630 851 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 YWHAGP61981 247 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 GRIN1Q05586 938 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 TTC38Q5R3I4 469 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 C10orf76Q5T2E6 689 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PPP1R2P3Q6NXS1 205 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 NACA2Q9H009 215 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 GID8Q9NWU2 228 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 NAIPQ13075 1403 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 C1orf146Q5VVC0 180 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 NT5C3AQ9H0P0 336 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 BATF3Q9NR55 127 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 STXBP3O00186 592 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 IFNAR2P48551 515 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PDE1BQ01064 536 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 LDHAL6AQ6ZMR3 332 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ZNF653Q96CK0 615 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 SNRKQ9NRH2 765 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 STMN3Q9NZ72 180 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 IBTKQ9P2D0 1353 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 CCDC78A2IDD5 438 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 H0Y626 953 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PGRMC1O00264 195 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 IPO5O00410 1097 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 TRIM16O95361 564 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PDE6CP51160 858 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 MDM2Q00987 491 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 CALCRLQ16602 461 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 HORMAD1Q86X24 394 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 MYH15Q9Y2K3 1946 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ADGRL1O94910 1474 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 hCG_2014768A0A024R1R8 64 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 C4BPBP20851 252 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 DHX9Q08211 1270 aaKnown RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 NBPF5PQ86XG9 351 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 CRLF3Q8IUI8 442 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 STX19Q8N4C7 294 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 TRAF3IP3Q9Y228 551 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 S100A5P33763 92 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 CD109Q6YHK3 1445 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 TMEM247A6NEH6 219 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 KRT14P02533 472 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 HLA-DPA1P20036 260 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 DEFA1P59665 94 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 DEFA3P59666 94 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 ZNF174Q15697 407 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 FSCBQ5H9T9 825 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 PLIN2Q99541 437 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 KNL1Q8NG31 2342 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 ARHGEF35A5YM69 484 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 PRPSAP1Q14558 356 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 SLC9C2Q5TAH2 1124 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 TTLL11Q8NHH1 800 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 DCDC2Q9UHG0 476 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 ITGB1BP2Q9UKP3 347 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 GYG2O15488 501 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 CPP00450 1065 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 IQCB1Q15051 598 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 EP400NLQ6ZTU2 488 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 GCNT3O95395 438 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 PLS1Q14651 629 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 SLC44A4Q53GD3 710 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 U2AF1L4Q8WU68 220 aaKnown RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 C1orf112Q9NSG2 853 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 PNMA6AP0CW24 399 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 CLCN6P51797 869 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 TERF2Q15554 542 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 SBNO1A3KN83 1393 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 H0YCG3 227 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 RAB14P61106 215 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 CYLC2Q14093 348 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 HADHQ16836 314 aaKnown RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 FMO2Q99518 471 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 LMBRD1Q9NUN5 540 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 ATP11BQ9Y2G3 1177 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 BFSP1Q12934 665 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 SMYD2Q9NRG4 433 aa6.7□□□□□ -1.34
CSMD1-201ENST00000335551 DNAJC17Q9NVM6 304 aaKnown RBP6.7□□□□□ -1.34
CSMD1-201ENST00000335551 EXOC1LA0A1B0GW35 172 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 C6orf229H3BNL8 230 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 EXOC3O60645 756 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 TMEM259Q4ZIN3 620 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 HP1BP3Q5SSJ5 553 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 RETREG2Q8NC44 543 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 NEK9Q8TD19 979 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 CHEK2O96017 543 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SERPINB1P30740 379 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 KRR1Q13601 381 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 TMED2Q15363 201 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 CEP78Q5JTW2 689 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 TRAF7Q6Q0C0 670 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms