RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 TMOD1P28289 359 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 GBP2P32456 591 aaPredicted RBP12.37□□□□□ -0.43
CCDC87-201ENST00000333861 ADD2P35612 726 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 TRIM22Q8IYM9 498 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
CCDC87-201ENST00000333861 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
CCDC87-201ENST00000333861 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
CCDC87-201ENST00000333861 MYO5AQ9Y4I1 1855 aaKnown RBP12.37□□□□□ -0.43
CCDC87-201ENST00000333861 DDR1Q08345 913 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 QPCTQ16769 361 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC87-201ENST00000333861 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 GGT7Q9UJ14 662 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 COL22A1Q8NFW1 1626 aaPredicted RBP12.36□□□□□ -0.43
CCDC87-201ENST00000333861 GOLGA6L7A0A1B0GV03 622 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 PSMD14O00487 310 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 C21orf2O43822 256 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 ARMC3Q5W041 872 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 MFSD6Q6ZSS7 791 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
CCDC87-201ENST00000333861 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
CCDC87-201ENST00000333861 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
CCDC87-201ENST00000333861 SPATA31A5Q5VU36 1347 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 SPATA31A7Q8IWB4 1347 aa12.36□□□□□ -0.43
CCDC87-201ENST00000333861 GOLGA8KD6RF30 607 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 RASSF9O75901 435 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 TUBBP07437 444 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 GCKP35557 465 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 INHBEP58166 350 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 PAK1Q13153 545 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 SNCBQ16143 134 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 PIGBQ92521 554 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 RBM12Q9NTZ6 932 aaKnown RBP12.35□□□□□ -0.43
CCDC87-201ENST00000333861 BAIAP2L1Q9UHR4 511 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 FTCDO95954 541 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 ITGA6P23229 1130 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
CCDC87-201ENST00000333861 ZNF654Q8IZM8 581 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
CCDC87-201ENST00000333861 OSBPL7Q9BZF2 842 aa12.35□□□□□ -0.43
CCDC87-201ENST00000333861 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 FCER1AP12319 257 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 MAATS1Q7Z4T9 603 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 LRRC15Q8TF66 581 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 L3MBTL1Q9Y468 752 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 FAM237AA0A1B0GTK4 181 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 OPA1O60313 960 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 GLI1P08151 1106 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 MCM3P25205 808 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 BCAMP50895 628 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 TUBB4BP68371 445 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 PTGISQ16647 500 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 PAPD7Q5XG87 772 aaKnown RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 MAEAQ7L5Y9 396 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 C2CD5Q86YS7 1000 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 CREG2Q8IUH2 290 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 FANCBQ8NB91 859 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 EPN3Q9H201 632 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 LRP6O75581 1613 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 C5P01031 1676 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 NR1D1P20393 614 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 SMTNP53814 917 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 SARNPP82979 210 aaKnown RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 SNX1Q13596 522 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
CCDC87-201ENST00000333861 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 CCDC121Q6ZUS5 278 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 HAUS4Q9H6D7 363 aa12.34□□□□□ -0.43
CCDC87-201ENST00000333861 AFF2P51816 1311 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 TARSL2A2RTX5 802 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 AP1G2O75843 785 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 PPP1R37O75864 691 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 DYNLL1P63167 89 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms