RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 MRC1P22897 1456 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 GYPCP04921 128 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 SLC8A1P32418 973 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 KRT31Q15323 416 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 TRIM73Q86UV7 250 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 LSP1P33241 339 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 USP14P54578 494 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 MXRA7P84157 204 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 DPYDQ12882 1025 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 TSC22D3Q99576 134 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 ABCC6O95255 1503 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 ATP1A1P05023 1023 aaKnown RBP13.14□□□□□ -0.31
LIMK2-202ENST00000333611 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 CUL4BQ13620 913 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 NELFBQ8WX92 580 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC113Q9H0I3 377 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 IL2RBP14784 551 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 TRAF1Q13077 416 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
LIMK2-202ENST00000333611 FAM47AQ5JRC9 791 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
LIMK2-202ENST00000333611 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
LIMK2-202ENST00000333611 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 NMT2O60551 498 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 LIFRP42702 1097 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 SMTNP53814 917 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 ERVK-24P63145 666 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 LAMB3Q13751 1172 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 SLC30A9Q6PML9 568 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 SGMS1Q86VZ5 419 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
LIMK2-202ENST00000333611 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
LIMK2-202ENST00000333611 NEFHP12036 1026 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 PCK1P35558 622 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 KCNJ18B7U540 433 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 GNAT1P11488 350 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 ERCC5P28715 1186 aaPredicted RBP13.13□□□□□ -0.31
LIMK2-202ENST00000333611 INHBEP58166 350 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 KCNJ12Q14500 433 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 B4GALNT2Q8NHY0 566 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 ESR2Q92731 530 aa13.13□□□□□ -0.31
LIMK2-202ENST00000333611 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
LIMK2-202ENST00000333611 GOLGA8KD6RF30 607 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 PAK1Q13153 545 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 LPIN2Q92539 896 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 ITFG2Q969R8 447 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 NR1D1P20393 614 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 FSBPO95073 299 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TUBBP07437 444 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TMOD1P28289 359 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 STAT6P42226 847 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 GYG1P46976 350 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 FNTAP49354 379 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
LIMK2-202ENST00000333611 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-202ENST00000333611 PTPROQ16827 1216 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 MFSD4BQ5TF39 518 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 EHBP1Q8NDI1 1231 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
LIMK2-202ENST00000333611 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms