RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ICA1Q05084 483 aa17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 RNF135Q8IUD6 432 aa17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 CCDC144CPQ8IYA2 1237 aa17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 PABPC5Q96DU9 382 aaKnown RBP17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 POP1Q99575 1024 aaKnown RBP17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 RIPK3Q9Y572 518 aa17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 LINC01553A4QN01 128 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 KRT37O76014 449 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 WDR5P61964 334 aaKnown RBP17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 EVX2Q03828 476 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 TRIM67Q6ZTA4 783 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 PIH1D3Q9NQM4 214 aaKnown RBP17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 HDAC5Q9UQL6 1122 aa17.92■□□□□ 0.46
CTHRC1-201ENST00000330295 EPG5Q9HCE0 2579 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 NAV1Q8NEY1 1877 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 PROB1E7EW31 1015 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 DYNC1LI2O43237 492 aaPredicted RBP17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 PTGS1P23219 599 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 TTC39AQ5SRH9 613 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 EP400NLQ6ZTU2 488 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 ASCL5Q7RTU5 278 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 FBXL6Q8N531 539 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 RETREG2Q8NC44 543 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 MRPL38Q96DV4 380 aaKnown RBP17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 RAD9AQ99638 391 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
CTHRC1-201ENST00000330295 COL19A1Q14993 1142 aa17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 TIGD5Q53EQ6 642 aa17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 ANKRD35Q8N283 1001 aa17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 FBXO22Q8NEZ5 403 aa17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 MYH8P13535 1937 aa17.9■□□□□ 0.46
CTHRC1-201ENST00000330295 SRGAP3O43295 1099 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 GJB5O95377 273 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 SMPD1P17405 629 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 ZAP70P43403 619 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 DEFB103AP81534 67 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 SMAD2Q15796 467 aaKnown RBP17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 PTPROQ16827 1216 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 FAM83BQ5T0W9 1011 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 COL4A6Q14031 1691 aa17.89■□□□□ 0.45
CTHRC1-201ENST00000330295 SOWAHBA6NEL2 793 aa17.88■□□□□ 0.45
CTHRC1-201ENST00000330295 SLC4A3P48751 1232 aa17.88■□□□□ 0.45
CTHRC1-201ENST00000330295 POTEHQ6S545 545 aa17.88■□□□□ 0.45
CTHRC1-201ENST00000330295 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
CTHRC1-201ENST00000330295 PRR23AA6NEV1 266 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 E9PSI1 815 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 IDH1O75874 414 aaKnown RBP17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 AKR1B1P15121 316 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 TCEAL5Q5H9L2 206 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 SSH1Q8WYL5 1049 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 SLF1Q9BQI6 1058 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 C17orf80Q9BSJ5 609 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 MCM9Q9NXL9 1143 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 SWAP70Q9UH65 585 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 TRPC6Q9Y210 931 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 Q9Y3F1 56 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 GVINP1Q7Z2Y8 2422 aa17.87■□□□□ 0.45
CTHRC1-201ENST00000330295 ATP2A1O14983 1001 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 VCPP55072 806 aaKnown RBP17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 CPXCR1Q8N123 301 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 FSD1Q9BTV5 496 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 CLDND1Q9NY35 253 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 DMDP11532 3685 aa17.86■□□□□ 0.45
CTHRC1-201ENST00000330295 KMT2BQ9UMN6 2715 aaPredicted RBP17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 H0Y858 1186 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 RAD21O60216 631 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 EEF2P13639 858 aaKnown RBP17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 BFSP2Q13515 415 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 TRIP12Q14669 1992 aaPredicted RBP17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 LRRFIP1Q32MZ4 808 aaKnown RBP17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 FAM47CQ5HY64 1035 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 RIOK1Q9BRS2 568 aaKnown RBP17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 TLR9Q9NR96 1032 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 POLR3EQ9NVU0 708 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 FBXO40Q9UH90 709 aa17.85■□□□□ 0.45
CTHRC1-201ENST00000330295 LTBRP36941 435 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 ZXDAP98168 799 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 MTX1Q13505 466 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 TMEM63BQ5T3F8 832 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 MIER1Q8N108 512 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 MEIS3Q99687 375 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 FOXD4L1Q9NU39 408 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
CTHRC1-201ENST00000330295 MYO7AQ13402 2215 aa17.83■□□□□ 0.45
CTHRC1-201ENST00000330295 ASB14A6NK59 587 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 STXBP3O00186 592 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 MBTPS2O43462 519 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 AVPR2P30518 371 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms