RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 PPP1R16BQ96T49 567 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 SLC8A3P57103 927 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 ALX1Q15699 326 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 JPH2Q9BR39 696 aaPredicted RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 KIAA1024Q9UPX6 916 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 NDUFB10O96000 172 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 FDX1P10109 184 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 TNNI1P19237 187 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 TM4SF1P30408 202 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 RAPGEF1Q13905 1077 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 NLGN2Q8NFZ4 835 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 CTNND1O60716 968 aaKnown RBP16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 LIG4P49917 911 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 CTAGE1Q96RT6 745 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 BLZF1Q9H2G9 400 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 GPS2Q13227 327 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 LPAR1Q92633 364 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 AIFM3Q96NN9 605 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 RABGAP1Q9Y3P9 1069 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 PHLPP1O60346 1717 aa16.05■□□□□ 0.16
SYNGR1-203ENST00000328933 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 INPP5BP32019 993 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 ERO1BQ86YB8 467 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 RGL2O15211 777 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 ZBED2Q9BTP6 218 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 IGSF3O75054 1194 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 PSMD1Q99460 953 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 MTMR4Q9NYA4 1195 aa16.04■□□□□ 0.16
SYNGR1-203ENST00000328933 ADM5C9JUS6 153 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 ZNF202O95125 648 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 SESTD1Q86VW0 696 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 GLIPR1L2Q4G1C9 344 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 CSGALNACT2Q8N6G5 542 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 KCNQ5Q9NR82 932 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 KRT5P13647 590 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 NEK11Q8NG66 645 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 VCPKMTQ9H867 229 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 K7ENM7 598 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 WNT10BO00744 389 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 CD19P15391 556 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 PTGS1P23219 599 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 NUB1Q9Y5A7 615 aa16.03■□□□□ 0.16
SYNGR1-203ENST00000328933 COPB2P35606 906 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 DMP1Q13316 513 aaPredicted RBP16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 NACA2Q9H009 215 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 CALUO43852 315 aaPredicted RBP16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 ORC4O43929 436 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 PPP1R2P41236 205 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 GTF2A2P52657 109 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 TFDP1Q14186 410 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 DPF2Q92785 391 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
SYNGR1-203ENST00000328933 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.15
SYNGR1-203ENST00000328933 ZNF512BQ96KM6 892 aaPredicted RBP16.02■□□□□ 0.15
SYNGR1-203ENST00000328933 CYP2J2P51589 502 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 PRDM5Q9NQX1 630 aaPredicted RBP16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 ZBBXA8MT70 800 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 UBXN1Q04323 297 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 TYRO3Q06418 890 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 MTMR1Q13613 665 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
SYNGR1-203ENST00000328933 NLRP7Q8WX94 980 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms