RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 HYOU1Q9Y4L1 999 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 AFF2P51816 1311 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ZNF263O14978 683 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 CALM1P0DP23 149 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 CALM2P0DP24 149 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 CALM3P0DP25 149 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 SMTNP53814 917 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 PMS1P54277 932 aaKnown RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 NAP1L1P55209 391 aaKnown RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 SPA17Q15506 151 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 ESR2Q92731 530 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 RUFY1Q96T51 708 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 GREM2Q9H772 168 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 MAGEC2Q9UBF1 373 aaPredicted RBP12.55□□□□□ -0.4
GINS3-202ENST00000328514 PLAGL2Q9UPG8 496 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 CAPN7Q9Y6W3 813 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 DUSP10Q9Y6W6 482 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 TNKSO95271 1327 aa12.55□□□□□ -0.4
GINS3-202ENST00000328514 CHUKO15111 745 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PJA2O43164 708 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 KLRC4O43908 158 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 LSP1P33241 339 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TDO2P48775 406 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 CTSWP56202 376 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
GINS3-202ENST00000328514 GPATCH11Q8N954 259 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TUBGCP2Q9BSJ2 902 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
GINS3-202ENST00000328514 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 RREB1Q92766 1687 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 MACROD2A1Z1Q3 448 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TRIM49BA6NDI0 452 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 DDAH1O94760 285 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
GINS3-202ENST00000328514 PPP1R2P41236 205 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PPARAQ07869 468 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TROAPQ12815 778 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PDCLQ13371 301 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 SKIDA1Q1XH10 827 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TMTC3Q6ZXV5 915 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
GINS3-202ENST00000328514 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 DUSP9Q99956 384 aaKnown RBP12.54□□□□□ -0.4
GINS3-202ENST00000328514 DISC1Q9NRI5 854 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 SLC4A4Q9Y6R1 1079 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 MYH3P11055 1940 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
GINS3-202ENST00000328514 B4DLN1 442 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 PRKAB2O43741 272 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 PPP1R37O75864 691 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 RASSF9O75901 435 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 FGRP09769 529 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
GINS3-202ENST00000328514 TBC1D8BQ0IIM8 1120 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 COBLL1Q53SF7 1204 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 C6orf89Q6UWU4 347 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
GINS3-202ENST00000328514 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
GINS3-202ENST00000328514 TRIM47Q96LD4 638 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
GINS3-202ENST00000328514 ALS2CR12Q96Q35 445 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
GINS3-202ENST00000328514 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 MAGEF1Q9HAY2 307 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 LRWD1Q9UFC0 647 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 PCDHA13Q9Y5I0 950 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
GINS3-202ENST00000328514 BICDL2A1A5D9 508 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 ZNF233A6NK53 670 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 PRDM1O75626 825 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 STAT6P42226 847 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 PAFAH1B1P43034 410 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 CYP27A1Q02318 531 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 RASGRF1Q13972 1273 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 PTGISQ16647 500 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 MIIPQ5JXC2 388 aa12.52□□□□□ -0.4
GINS3-202ENST00000328514 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms