RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 IKBKBO14920 756 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 ZEB2O60315 1214 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 CDC25BP30305 580 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 MORC3Q14149 939 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 MIS18BP1Q6P0N0 1132 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 TMX1Q9H3N1 280 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 ARMCX3Q9UH62 379 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 TMEM131LA2VDJ0 1609 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 SLIT1O75093 1534 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 KCNJ18B7U540 433 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 PRPF6O94906 941 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 EEF1GP26641 437 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 KCNJ12Q14500 433 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 CFAP58Q5T655 872 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 RCOR1Q9UKL0 485 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 BZW2Q9Y6E2 419 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 TECP42680 631 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 CDK8P49336 464 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 PLCB3Q01970 1234 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 PPP1R7Q15435 360 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 NACC1Q96RE7 527 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 LZTFL1Q9NQ48 299 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 NR1I2O75469 434 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 KRT9P35527 623 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 BPIFB4P59827 614 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 PTGDRQ13258 359 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 FAM178BQ8IXR5 827 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 MAGEA1P43355 309 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 LIG4P49917 911 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 FAM173BQ6P4H8 233 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 RSPH3Q86UC2 560 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 PPP1R14CQ8TAE6 165 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL4A5-201ENST00000328300 MMP14P50281 582 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 TAB2Q9NYJ8 693 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 ADCK5Q3MIX3 580 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 GPATCH11Q8N954 259 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
COL4A5-201ENST00000328300 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 IVLP07476 585 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 GPKOWQ92917 476 aaPredicted RBP eCLIP12.6□□□□□ -0.39
COL4A5-201ENST00000328300 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
COL4A5-201ENST00000328300 YARSP54577 528 aaKnown RBP12.6□□□□□ -0.39
COL4A5-201ENST00000328300 PNOCQ13519 176 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 OR8K1Q8NGG5 319 aa12.6□□□□□ -0.39
COL4A5-201ENST00000328300 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 STAT1P42224 750 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 TERF1P54274 439 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 FAM102BQ5T8I3 360 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-201ENST00000328300 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
COL4A5-201ENST00000328300 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 ARHGEF37A1IGU5 675 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 K7ENM7 598 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 ORC4O43929 436 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 HARSP12081 509 aaKnown RBP12.59□□□□□ -0.39
COL4A5-201ENST00000328300 ALDH3A1P30838 453 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 CRKP46108 304 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 PPLO60437 1756 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-201ENST00000328300 LPXNO60711 386 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 FOXO4P98177 505 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 PRKG1Q13976 671 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 SYT10Q6XYQ8 523 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 GOLGA8HP0CJ92 632 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 UTYO14607 1347 aa12.59□□□□□ -0.39
COL4A5-201ENST00000328300 SLFN14P0C7P3 912 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.39
COL4A5-201ENST00000328300 SURF1Q15526 300 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 ZNF354CQ86Y25 554 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 C1orf112Q9NSG2 853 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 PARP2Q9UGN5 583 aa12.58□□□□□ -0.39
COL4A5-201ENST00000328300 TMTC3Q6ZXV5 915 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 NEK9Q8TD19 979 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms