RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
SSBP3-201ENST00000326956 AKR1B10O60218 316 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 SEMA3FQ13275 785 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 SNX12Q9UMY4 172 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 NAALADL2Q58DX5 795 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
SSBP3-201ENST00000326956 GOLGA8KD6RF30 607 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 ORC4O43929 436 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 INF2Q27J81 1249 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 BRINP3Q76B58 766 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 C4orf32Q8N8J7 132 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 BCAS4Q8TDM0 211 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 MTMR7Q9Y216 660 aa16.27■□□□□ 0.2
SSBP3-201ENST00000326956 KLRC4O43908 158 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 HSF2BPO75031 334 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 PPP1R2P41236 205 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 IRAK1P51617 712 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 KRT26Q7Z3Y9 468 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 ANKRD18AQ8IVF6 992 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 MMGT1Q8N4V1 131 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.19
SSBP3-201ENST00000326956 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 BCORQ6W2J9 1755 aa16.27■□□□□ 0.19
SSBP3-201ENST00000326956 AGPSO00116 658 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 NAP1L1P55209 391 aaKnown RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 AMPD3Q01432 767 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 CABP7Q86V35 215 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 SMCR8Q8TEV9 937 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 IQCDQ96DY2 449 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 PSMB7Q99436 277 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 DUSP9Q99956 384 aaKnown RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 LRRC1Q9BTT6 524 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 TTYH3Q9C0H2 523 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 KBTBD4Q9NVX7 518 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 MYH13Q9UKX3 1938 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 ARAP2Q8WZ64 1704 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 ADAMTS3O15072 1205 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 FGRP09769 529 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 AENQ8WTP8 325 aaKnown RBP16.26■□□□□ 0.19
SSBP3-201ENST00000326956 TMEM60Q9H2L4 133 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 RABEP2Q9H5N1 569 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 HYOU1Q9Y4L1 999 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 NUP98P52948 1817 aa16.26■□□□□ 0.19
SSBP3-201ENST00000326956 GNGT1P63211 74 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 SPATA4Q8NEY3 305 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 MAGEF1Q9HAY2 307 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 BAZ2AQ9UIF9 1905 aaKnown RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 MOCS3O95396 460 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 GNAQP50148 359 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 EPHB4P54760 987 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 CDK17Q00537 523 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.196e-6■■□□□ 13.9
SSBP3-201ENST00000326956 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 LAD1O00515 517 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 PLCG1P19174 1290 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 BRD2P25440 801 aaKnown RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 SLC7A5Q01650 507 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 RUBCNQ92622 972 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 ERGIC2Q96RQ1 377 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 MLXIPQ9HAP2 919 aa16.25■□□□□ 0.19
SSBP3-201ENST00000326956 FAM207AQ9NSI2 230 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 DMGDHQ9UI17 866 aaKnown RBP16.25■□□□□ 0.19
SSBP3-201ENST00000326956 LRP5O75197 1615 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 A0A1W2PQJ5 194 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 ERLIN2O94905 339 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 KIF11P52732 1056 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 MRPS25P82663 173 aaKnown RBP16.24■□□□□ 0.19
SSBP3-201ENST00000326956 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
SSBP3-201ENST00000326956 C8orf74Q6P047 294 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 PNMA1Q8ND90 353 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-201ENST00000326956 PLEKP08567 350 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-201ENST00000326956 CXCR5P32302 372 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 LIG3P49916 1009 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-201ENST00000326956 CAPN6Q9Y6Q1 641 aa16.24■□□□□ 0.19
SSBP3-201ENST00000326956 ZNF804BA4D1E1 1349 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms