RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 DONSONQ9NYP3 566 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 ZHX2Q9Y6X8 837 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 SPTLC2O15270 562 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 CELF2O95319 508 aaKnown RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 RASA1P20936 1047 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 RPS12P25398 132 aaKnown RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 MARCKSP29966 332 aaPredicted RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 SPP2Q13103 211 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 CNPY4Q8N129 248 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 SUGT1Q9Y2Z0 365 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 BAZ2AQ9UIF9 1905 aaKnown RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 LRP5O75197 1615 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 GOLGA8AA7E2F4 631 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 TMEM232C9JQI7 657 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 KCNJ6P48051 423 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 ZNF274Q96GC6 653 aaPredicted RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 KRT23Q9C075 422 aa11.63□□□□□ -0.55
ABCF1-201ENST00000326195 ALDH8A1Q9H2A2 487 aaPredicted RBP11.63□□□□□ -0.55
ABCF1-201ENST00000326195 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 A0A0U1RQJ8 604 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 SERPINC1P01008 464 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 TXLNAP40222 546 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 CCDC91Q7Z6B0 441 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
ABCF1-201ENST00000326195 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 FAM151AQ8WW52 585 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 RABGGTAQ92696 567 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ALG1Q9BT22 464 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ABCB6Q9NP58 842 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
ABCF1-201ENST00000326195 LTBP3Q9NS15 1303 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 POTECB2RU33 542 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 KCNV1Q6PIU1 500 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
ABCF1-201ENST00000326195 PPP2R2CQ9Y2T4 447 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 CCDC151A5D8V7 595 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 SHMT1P34896 483 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 ICA1Q05084 483 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 TADA2BQ86TJ2 420 aa11.62□□□□□ -0.55
ABCF1-201ENST00000326195 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 LIG3P49916 1009 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 TRIM22Q8IYM9 498 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 SLC26A6Q9BXS9 759 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 ZNF341Q9BYN7 854 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 HOOK1Q9UJC3 728 aaKnown RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 ZBTB43O43298 467 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 CPP00450 1065 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 MAP2K2P36507 400 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 FANCCQ00597 558 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 CPXCR1Q8N123 301 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 L1RE1Q9UN81 338 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 KARSQ15046 597 aaKnown RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-201ENST00000326195 STAG2Q8N3U4 1231 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 PNMA1Q8ND90 353 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 DESI2Q9BSY9 194 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
ABCF1-201ENST00000326195 CCDC189A1A4V9 331 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 TUBB4AP04350 444 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 NF2P35240 595 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 NDUFA8P51970 172 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 HSP90AA4PQ58FG1 418 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 VPS33BQ9H267 617 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 HOMER2Q9NSB8 354 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 HNRNPH1P31943 449 aaKnown RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 ZNF280AP59817 542 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 FMR1NBQ8N0W7 255 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-201ENST00000326195 GOLGA1Q92805 767 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 TMEM47Q9BQJ4 181 aa11.6□□□□□ -0.55
ABCF1-201ENST00000326195 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms