RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 USP28Q96RU2 1077 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 PSTPIP2Q9H939 334 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 BTBD7Q9P203 1132 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 ZNF214Q9UL59 606 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 ADAMTS5Q9UNA0 930 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 FIBPO43427 364 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 ICAM1P05362 532 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 TOB1P50616 345 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 FOXP1Q9H334 677 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 TXNRD2Q9NNW7 524 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.4
PRPF3-201ENST00000324862 NFIBO00712 420 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
PRPF3-201ENST00000324862 CETPP11597 493 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 ADCY7P51828 1080 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 CYP4F22Q6NT55 531 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 PAGR1Q9BTK6 254 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 C6orf50Q9HD87 102 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 PDHXO00330 501 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 ZBED4O75132 1171 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 HERVK_113P62684 666 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
PRPF3-201ENST00000324862 CTDP1Q9Y5B0 961 aaPredicted RBP17.52■□□□□ 0.4
PRPF3-201ENST00000324862 CLIC4Q9Y696 253 aa17.52■□□□□ 0.4
PRPF3-201ENST00000324862 PARP14Q460N5 1801 aa17.52■□□□□ 0.39
PRPF3-201ENST00000324862 CENPFP49454 3210 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 MEIS2O14770 477 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 PDIA4P13667 645 aaKnown RBP17.51■□□□□ 0.39
PRPF3-201ENST00000324862 CALML3P27482 149 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 SNRNP48Q6IEG0 339 aaKnown RBP17.51■□□□□ 0.39
PRPF3-201ENST00000324862 RIC8AQ9NPQ8 531 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 CFBP00751 764 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 GNA11P29992 359 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 NFKBIBQ15653 356 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 REXO1Q8N1G1 1221 aaKnown RBP17.51■□□□□ 0.39
PRPF3-201ENST00000324862 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
PRPF3-201ENST00000324862 BRMS1Q9HCU9 246 aa17.51■□□□□ 0.39
PRPF3-201ENST00000324862 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRPF3-201ENST00000324862 SLC10A3P09131 477 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 FSTL1Q12841 308 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 INF2Q27J81 1249 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 Q3C1V9 767 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 LBX2Q6XYB7 198 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 DAGLBQ8NCG7 672 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 CLEC4DQ8WXI8 215 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 CUL5Q93034 780 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
PRPF3-201ENST00000324862 BRAPQ7Z569 592 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 RBPJLQ9UBG7 517 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
PRPF3-201ENST00000324862 CNMDO75829 334 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
PRPF3-201ENST00000324862 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 ATP6V1DQ9Y5K8 247 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
PRPF3-201ENST00000324862 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 FCHSD1Q86WN1 690 aa17.49■□□□□ 0.39
PRPF3-201ENST00000324862 COL11A1P12107 1806 aaPredicted RBP17.48■□□□□ 0.39
PRPF3-201ENST00000324862 CCDC194A0A1B0GVG4 234 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 EDIL3O43854 480 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 MCM4P33991 863 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 STAT3P40763 770 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 MRPL12P52815 198 aaKnown RBP17.48■□□□□ 0.39
PRPF3-201ENST00000324862 RGS22Q8NE09 1264 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
PRPF3-201ENST00000324862 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
PRPF3-201ENST00000324862 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
PRPF3-201ENST00000324862 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 RNF146Q9NTX7 359 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 COL20A1Q9P218 1284 aa17.48■□□□□ 0.39
PRPF3-201ENST00000324862 AOC2O75106 756 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 OSBPP22059 807 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 UBXN2AP68543 259 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 KRT85P78386 507 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 GALNT17Q6IS24 598 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 TBCKQ8TEA7 893 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
PRPF3-201ENST00000324862 MRPL11Q9Y3B7 192 aaKnown RBP17.47■□□□□ 0.39
PRPF3-201ENST00000324862 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
PRPF3-201ENST00000324862 TCHHQ07283 1943 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 ABCB11O95342 1321 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 MYPNQ86TC9 1320 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 GADD45BO75293 160 aaPredicted RBP17.47■□□□□ 0.39
PRPF3-201ENST00000324862 ZNF174Q15697 407 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 NSMFQ6X4W1 530 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 ANKRD13CQ8N6S4 541 aa17.47■□□□□ 0.39
PRPF3-201ENST00000324862 APLP1P51693 650 aa17.46■□□□□ 0.39
PRPF3-201ENST00000324862 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms